Sequence detailsbmy_18648 (Coding sequence)

Part of scaffold_1811 (SequenceType object (1))

For more information consult the page for scaffold_1811 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM31ENSBTAG00000004490 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000005888, Cow)

Protein Percentage 75.66%
cDNA percentage 86.8%
Ka/Ks Ratio 0.70914 (Ka = 0.137, Ks = 0.1932)

Additional orthologs identified in other species via the OPTIC pipeline.

TRIM31 (Human)   Trim31 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1968 bp    Location:107201..132471   Strand:+
Raw sequence 
>bmy_18648
ATGAGTCTGACTCAGATCAGCTTTAAGGTGCTCTCAGATCCCCATGGAGCTAATGAATGGGGTAGGGGACAGTTTGAAGCAAAGGTGTCCACAGAAGACTTCGAGACTTTCTACAGACTTGAAGCAGCCCTCTACCCCACCATGGCCAATCAACAGTTTGCCAGTAAGCTTCAGGAGGAAGTGATCTGCCCCATCTGCATGGATATTCTGCAGGACCCTGCTACCATCGACTGCGGGCACAATTTCTGCCTCAGGTGCATCACTCAGATTGGGGAAGAAGGAGACAGCCTTCTTAAATGTCCCCTCTGCAACAAAATTGTGAGGAGGGACACGATCGCGTCCAACTGGCTGTTGGTGAATCTGGTGGAGAAAATCCAAGCTATGGATCCCTCTGAGATGCAGCCAGAAACGAAAGAGCTGAGATGTCTGAGGCACGGGGAGAAGTATCATTTCTTCTGTGAGTTCGATGGCAAGTTCCTCTGTGTGGTGTGTCGTGAATCCAAGGACCACAAATCCCACAATGCAACTTTGATAGAAGAAGCTGCCCAGAGGTATCAGGTAGGCATTTGGGGATTCCCCTCCCAGTACCCACATCAGACTAGGAGTTCAGGGCAGATTCAATTGCAGGTTGAGGCCTTGCAGCGAAAAGAGAGGGCGATAGTTCACACGAAGTCACAAGGTGAACAGAGGATCAGTGTCTTCATGGCCCACGTGGAATCTGAGAGGCAAAAGATCATCACAGCATTCAGACAGCTGCATCGGGTGCTACAGGAGGAGAAGAACTTCCTCCTGTCACGGATCAACTGGTTGGATCAGGAGATCACCAAGTGGAAGAAATTCTATATCATTTCCACCAAGTCGCAGCTGAACTCTCTTGGGAAGCTTAAGGATTCCCTGAAGGCCAGGCAGTGTTTGCCGCCCAGCCAGCTGCTCCAGGACATCAAAAATGTCTTGTGCAGGAGTGAAGCATTTTGCTTTCTCAACCCAACCCCTGTTTCAATGGACCTGGAGAAAAAACTCAGTGACGCCAAGTCACGGCATGATCCCTTCACAGAGAGCCTGAAGAAATTCAAAGACAGCCTCCAGGCTGAGAGCAAGAAAGATAAAAGCAAATTCTTCAAAGGCATGACTGAAGAACACATAAAGAGCTGGTACCTGTCAAACAAAAACAATCCTAAAATGAACGAAACCTTGGAGCCTGAGTCGACCCCTCCAGTTGACAGAACAACTAAACCAGTGCCACCAAATCCCAAACCCTCAACTTCATTCGCCCCACTCTTCCAGAGACGAAGCAGGGCCTCTTTTGTTTCTTATTCACCAATCCAAGACAGCTCTGACAACCTGAGGGGCCCTGGAGCTACGGTTATTGAAGAGCTCAAGATGGCGCTGGATATGAGGACCACACGAAACGGGGAAGGAAGAGGAGATAGTCTTCCCGCAGCCCCAGTGACCCTGGATGCAGCCTCGGCTCACCCGGATCTCATCATTTCCCAGGATCTGAAGACAGTGACGCTGGACCAAGTTTCTCAAAGCGGCTGGACTGAGCCCACCGACCCTGAGCGCTTCCATCCGCTCCGCTGTGTCCTGGGCTTGCCAGGCTTCTCCACCGGCTGCCAGGCCTGGGAGGCGGAGCTCCAAGGGCCCGGGGGCGGGGGCTGCGTGGTGGGCGTGGCCTCAGAGCCAGTACCACGGAGGGGCATGCTGGTGTTGGAGCCCTTGACCGGCTTCTGGGCGCTGAGCATCGCAGGCTCCGAGTGCCAGGCGCTCACCAAGGCCGGCACCCGGGAGGCTCTCTCGGTCTGTCCCAGGAAAGTGGGCGTCCGAGTGAATCACGAATGCGGGGAGGTCGTCTTCTACGACGCCACTACCAGCAACCACATCTACACCTTCCAGGCCTCCTTTCCAGGGCAGGTCTTCCCCTTTTTCCAGCTCTTGTTTCCCGGCACCCAGATCACCCTGAGTCCCTAG

Related Sequences

bmy_18648T0 SequenceType object (3)

Length: 656 aa      
>bmy_18648T0
MSLTQISFKVLSDPHGANEWGRGQFEAKVSTEDFETFYRLEAALYPTMANQQFASKLQEEVICPICMDILQDPATIDCGHNFCLRCITQIGEEGDSLLKCPLCNKIVRRDTIASNWLLVNLVEKIQAMDPSEMQPETKELRCLRHGEKYHFFCEFDGKFLCVVCRESKDHKSHNATLIEEAAQRYQVGIWGFPSQYPHQTRSSGQIQLQVEALQRKERAIVHTKSQGEQRISVFMAHVESERQKIITAFRQLHRVLQEEKNFLLSRINWLDQEITKWKKFYIISTKSQLNSLGKLKDSLKARQCLPPSQLLQDIKNVLCRSEAFCFLNPTPVSMDLEKKLSDAKSRHDPFTESLKKFKDSLQAESKKDKSKFFKGMTEEHIKSWYLSNKNNPKMNETLEPESTPPVDRTTKPVPPNPKPSTSFAPLFQRRSRASFVSYSPIQDSSDNLRGPGATVIEELKMALDMRTTRNGEGRGDSLPAAPVTLDAASAHPDLIISQDLKTVTLDQVSQSGWTEPTDPERFHPLRCVLGLPGFSTGCQAWEAELQGPGGGGCVVGVASEPVPRRGMLVLEPLTGFWALSIAGSECQALTKAGTREALSVCPRKVGVRVNHECGEVVFYDATTSNHIYTFQASFPGQVFPFFQLLFPGTQITLSP*