Part of scaffold_1842 (Scaffold)

For more information consult the page for scaffold_1842 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FRMPD3 ENSTTRG00000003810 (Bottlenosed dolphin)

Gene Details

FERM and PDZ domain containing 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003581, Bottlenosed dolphin)

Protein Percentage 93.36%
cDNA percentage 93.22%
Ka/Ks Ratio 0.13281 (Ka = 0.0075, Ks = 0.0564)

FRMPD3 ENSBTAG00000003121 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004058, Cow)

Protein Percentage 94.2%
cDNA percentage 93.1%
Ka/Ks Ratio 0.11542 (Ka = 0.0278, Ks = 0.2407)

FRMPD3  (Minke Whale)

Gene Details

FERM and PDZ domain containing 3

External Links

Gene match (Identifier: BACU017197, Minke Whale)

Protein Percentage 93.52%
cDNA percentage 94.91%
Ka/Ks Ratio 0.53482 (Ka = 0.0446, Ks = 0.0835)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 4200 bp    Location:399466..422913   Strand:+
>bmy_18676
ATGCTGCCCGCCATGCTGGGGCACCAGGATGAGAAGCAGTCAGCCACCACCCTCCTAGTGGGACCCCGTCACGGCATCAGCCATGTTATTGACCTCAAAACCAACCTCACCACTGTGCTGTCCGAGTTCAGCAAGATCAGCAAGATCCAGCTGTTCCGGGAGAACCAGGGCGTGGCCCGGGTGGAGACCAGCATCATGGATGCCAAGCCTCTGGTGCTGTTGATGGAGTGGCCCGAAGCCACCAACTTTGCCTGCCTGATTGCGGGGTACTGCCGCCTCCTGCTGGATTCCAGGAAGATGGTCTTCTCCAGGCCCGCTAGCCAGCCTCTTCCACCTCCAATGATCAAGGCAGTACCTACCACCCAACTGGGCACCAGAGACCCAGGCCCGAGACGCCAAGGAAACTCAGCCACAGTCCTCAGCACCAGGGCTCATGTGTTGATTCTCTTTCTGGGTTTAGATTACATGCACAGCGCCCACCGCCCTGTCACTGGGGGCCACCTGGGGAAAAAGGAGAGTAGTTATGTGGGCAGCATGGGCACCAGCCCCAGGAAGTCGAGCCGCTGCACGCCCCTGCCTGCCGACTCTGAGCTTGTCAGCTTTTGCTACCTCCACATGCGGGAACAAAGGAAGGATCAGGAAAGCCGGACAGATGTCAATGAGAACTTAATCTTCTTTGAGGAGACCAGGCCCCGGACCAAGTCTGACCCCACGTCCAAGAGTTCTGGCCAAGGTTATGATGTGATCCCTGATGACTTTGATGCAGCTAGCCTAGACCACGAGCCTTGTGCCAGCAGGGCCCGGTCCTACACTTTGGATAATTCCCTTGGGGCTGAAGCCCTGAATTTCTACTGTGACTCTTGCAAAGCCAAACTCCAGGAGCAGCTGGGCCCTCGCAAAGGTGGGAGGTCTGGCTCCTCTCGTGACAATATGGTAGACCTGATGTCCCTCCCACCCCCCGGGAGTGAGGAGGAGGAAGAGGAGGAAGATGAGAGCACTTCGCTGTTGCCTGCCATTGCTGCCCCACCTCCTGGTTTCCGAGACAACAGTTCTGATGAAGATGACCCCAAGCGCCGGGCCGTCCAGAGCCAGGAGCAAGGACGCCACCTGCGTGGGCTCCTGTACGATGAGATTCCGGTGACACTGATTGACAGCGTGCAGACCCGGACAGTCCGAGATCATGCCCAGGAGCTAGATGATGCCCTGGTGTCCACTCTGCAGGCTCTGGAAGCCCTGGCAGCCTCAGAGGATGGACCACACCCCCCAGCCCCTCAGACTGCAGGTCTGATTGTGCTGGCCACAATCACCCCTGAATCATCGCTGGACTCGGGCCATGAAACCAACTCTTCGGAGCTCACGGACATGTCGGAGATGATGTCAGCCATGAAGCAACACCAGAATACCACCTACTTCCTGGCCCAGCATCTCAACAAGGACAGCCTCCTGGCCCGCAAGGACCTGCCCTTCCGGATCCAGAGCTGTGCAGCCCAGGCCGTCCTCACGGCCCCTTACTCTCTCGGGCGCCCGGATCCCAACCCGTCCCTCCAGCCAGCTGTCACAGGCCAGAGTCCTGGCGCCCCTGGTGCTCGGAGGAAGGTGCCCCCGTCAGAGGCCCAGCCACAGCGCGAGCGAACGTATGCCCTGGCTGTGCACCCAGCGCTGTCCCCTCAGCTGAGTGAGCAGAAGAATCTGAGCCTGCTATCCCCAGTTCCTGAGGACAAAGGGCCTGGCCACACTCGGGCGGGCCTAGAGATGTCACTGAGGGCGGCCACACCGTCCCTCAGTGAAGAGCAGGTCTCTGAGCTAAGGGAGAGCCTGCCCAAGGAGGTCAGGTTGAGCCCCAAGCTTATCCTGGACCCAAAGGGCAGTGTGACCCCAGCCATCATCTCGGCCGCCCTACAGCAGGTGGTTCATACTAAGAGTCTATCTGCCCCTGGCGGGGCCTTGGGGAACCCCCCCAACAGTGGGGAGAGGTTAGAGGCCAGCATGGGGAGGTCAGAGGTCAGCATGGGAAGGCCAGAAGTTAGCGTGATGAGCGGCAGTGCCAATAAGAATCTCAAGTTCAAAATGAGTCCCAGTGCTCCAGAGGCTTCACGGAATTCGCAGCCGCAGCTGAGCCCAGAGGTCTCTTCCGGCTCCAGAGCACCCGCAGGCAGCCGAGCTGATAGCCTGCACCTCTCCTCACAAGAGGACAGGCTGCCTATTCAAAGTTTCCCTCCCAAAAGCTATCTTTCTCGAGCGAGTCGAGAGTCAGTGGGCAAGCCAGGTAGCGGGGAGGTGGCGGGCAAGGGCGGGCCTGAGGGTGCTAAGCCTTCCCTGCACAAGCAGGGCACTGTCTCCGGCCAGGGGGAGAAGGGGCAGCTGGAGAGCACCCCCCAAAGCAGCAAGCTTGAAGACACCAGCCTGGTCCCCCGAGCCGGCTACCCCATGGTTCTGCAGAGCCCCAGCTGCCCGCCGCGAGGCCAGAGCCCGCTGAGGCCTCAGGCTGCCAGCCGGCAGGTGAGCACCATGCCCTCCAGAAAGATCGAAACGACCCTGGACGGAGCCCACTTGGCCTCCGAAGGCCCCACCAAGCCCAAATCGTCCCGGGGTCCTTTCCGGCTCCGCAACTTGTTCTCTGCCACCTTCCCAACCCGCCAGAAGAAGGAGACCGATGAGCGGCAGGCCCAGCTGCAGAAGGTAAAGCAGTATGAGCTGGAGTTCCTTGAGGAACTTCTCAAGCCACCAAGCCAGGGGGAGCTGTCGGGCACCGAGTACCTGCAACCCCCAGCTCCAGGCCGCTGCAGCTGCCAGCTCCGCAGCAGCCCCGTGCAGCAGGGGCCCGGCATGTCCCGAGAGCAGAGGCGCAGCTGTGATTGCAAGCGCATGTGCCGGGGGGCCCGACCTCAGGCCCCCCAGACGCCGGTGCCCAGCCTCCGGGGCAGGGAGAGGGACAGGGTCCCCCCTACCCAGAGGCAGCCAGAGGCCGGCCCAGGCTTGAGCCTCGGCAGCCCCACCAGTGTCCGGCGCATCCGCTCCACCAGCCTGGAATCCCGAGAGTGCCGATCGGACCCTGAGAGCGGCGTTTCATGCCTGACCACATGTGCCTCGGGGGGCGAGTGTCTAGGAGCTCCCAACTACAGGAAACTGATGCGCCGCTACAGCATCAGTGAGCTGGACCAGGGCGACAGGGCCTCGCTGACCTCGGACGTCTACCCGCACCCACCACTGGGCATGCTGCCCAGGGAGGCCAAGGAGGTAGAGGCAGGCCTCCCCCTAGGCGTGGGTCCCAAAAGCAAGTCCCTGGAATCCCCGACCCTGGGAGACCCCTCCTACGTCCACGTTGCCCCTGAGACCAAAGGCCCCAGACAGATGGCCGTGTTCTCACTGCCGGAAGAGGTGTACCGGAAGCCCGCGGAGCTGGACGAGGACAGCGAGAGCGGCAAGTGCTGCTCCATCCGCTACTGCTTCTACTACCGCAAGTGCGACATGGCGGATGACACCAGCGACGGCAAGGACGAGCTCTCCTACTCYATCCCCATGAAGATCCTGCCCGGCATGAAGCTGGACGAGCAGGTGGTGCCCGTGGTGAGCAGGACCCTGCAGGTGCTGGATGCCGCCACCTGCAGCAGCCCGGAGGCCTCCCGCACCCAGGAGATCGACCTGCGGGTGTCCACCTTCGAGGGGAGCCTGGCCAAGATCAACGCCCTGCGGGCCCATGCCTACGGCCTGCCTGACGGCTTCCTGGCCGCCCGGCTGGACACCAACGAGCTGCTGACGGTCCTGCGGCAGTGCGTGGCCAGCCCCGAGGCCCGYGCCCCCAAGCCCTACGTCTCCCAGATCTCTGAATACAAGCTCGAGCTGGCTCTCAAGTTCAAGGAGCTCCGGGCCTCCTGCCGCCGCGTGGCCAACGTGGACAAGAGCCCCACTCACATGCTGGCGGCCATCACGGGCAGCTTCCAGGTGCTGAGCAGCCTCATTGAGACCTTCGTGCGGCTGGTGTTCATCGTGCGCTCCGAGGCCCAGCGCCAAGAGCTGCTGGCCAAGGTGGAAGAGGTGGTGAGGAACTACACCTTCCTGCTGCGCGCAGCCGAGGAGTCCACCGCCCGGAGCCTCAAGCAGCAGCAGCAGGCAGCGGCCGCGGGGCACACACCGGGCTCCCCCACTTCAGCGACTGTTATGAGCACATTCACCCGCTCCTTAAAAACCCTTATTAAGTAG

Related Sequences

bmy_18676T0 Protein

Length: 1400 aa      View alignments
>bmy_18676T0
MLPAMLGHQDEKQSATTLLVGPRHGISHVIDLKTNLTTVLSEFSKISKIQLFRENQGVARVETSIMDAKPLVLLMEWPEATNFACLIAGYCRLLLDSRKMVFSRPASQPLPPPMIKAVPTTQLGTRDPGPRRQGNSATVLSTRAHVLILFLGLDYMHSAHRPVTGGHLGKKESSYVGSMGTSPRKSSRCTPLPADSELVSFCYLHMREQRKDQESRTDVNENLIFFEETRPRTKSDPTSKSSGQGYDVIPDDFDAASLDHEPCASRARSYTLDNSLGAEALNFYCDSCKAKLQEQLGPRKGGRSGSSRDNMVDLMSLPPPGSEEEEEEEDESTSLLPAIAAPPPGFRDNSSDEDDPKRRAVQSQEQGRHLRGLLYDEIPVTLIDSVQTRTVRDHAQELDDALVSTLQALEALAASEDGPHPPAPQTAGLIVLATITPESSLDSGHETNSSELTDMSEMMSAMKQHQNTTYFLAQHLNKDSLLARKDLPFRIQSCAAQAVLTAPYSLGRPDPNPSLQPAVTGQSPGAPGARRKVPPSEAQPQRERTYALAVHPALSPQLSEQKNLSLLSPVPEDKGPGHTRAGLEMSLRAATPSLSEEQVSELRESLPKEVRLSPKLILDPKGSVTPAIISAALQQVVHTKSLSAPGGALGNPPNSGERLEASMGRSEVSMGRPEVSVMSGSANKNLKFKMSPSAPEASRNSQPQLSPEVSSGSRAPAGSRADSLHLSSQEDRLPIQSFPPKSYLSRASRESVGKPGSGEVAGKGGPEGAKPSLHKQGTVSGQGEKGQLESTPQSSKLEDTSLVPRAGYPMVLQSPSCPPRGQSPLRPQAASRQVSTMPSRKIETTLDGAHLASEGPTKPKSSRGPFRLRNLFSATFPTRQKKETDERQAQLQKVKQYELEFLEELLKPPSQGELSGTEYLQPPAPGRCSCQLRSSPVQQGPGMSREQRRSCDCKRMCRGARPQAPQTPVPSLRGRERDRVPPTQRQPEAGPGLSLGSPTSVRRIRSTSLESRECRSDPESGVSCLTTCASGGECLGAPNYRKLMRRYSISELDQGDRASLTSDVYPHPPLGMLPREAKEVEAGLPLGVGPKSKSLESPTLGDPSYVHVAPETKGPRQMAVFSLPEEVYRKPAELDEDSESGKCCSIRYCFYYRKCDMADDTSDGKDELSYSIPMKILPGMKLDEQVVPVVSRTLQVLDAATCSSPEASRTQEIDLRVSTFEGSLAKINALRAHAYGLPDGFLAARLDTNELLTVLRQCVASPEARAPKPYVSQISEYKLELALKFKELRASCRRVANVDKSPTHMLAAITGSFQVLSSLIETFVRLVFIVRSEAQRQELLAKVEEVVRNYTFLLRAAEESTARSLKQQQQAAAAGHTPGSPTSATVMSTFTRSLKTLIK*