Part of scaffold_1827 (Scaffold)

For more information consult the page for scaffold_1827 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

WHAMM ENSTTRG00000000571 (Bottlenosed dolphin)

Gene Details

WAS protein homolog associated with actin, golgi membranes and microtubules

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000535, Bottlenosed dolphin)

Protein Percentage 94.87%
cDNA percentage 96.49%
Ka/Ks Ratio 0.40466 (Ka = 0.0259, Ks = 0.064)

WHAMM ENSBTAG00000017711 (Cow)

Gene Details

WASP homolog-associated protein with actin, membranes and microtubules

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023556, Cow)

Protein Percentage 85.03%
cDNA percentage 88.21%
Ka/Ks Ratio 0.33835 (Ka = 0.0877, Ks = 0.2592)

WHAMM  (Minke Whale)

Gene Details

WAS protein homolog associated with actin, golgi membranes and microtubules

External Links

Gene match (Identifier: BACU016049, Minke Whale)

Protein Percentage 91.96%
cDNA percentage 93.99%
Ka/Ks Ratio 0.64458 (Ka = 0.0558, Ks = 0.0865)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2289 bp    Location:357816..377139   Strand:+
>bmy_18685
ATGGAGGACGAGCAACCCGACAGCTTGGAGGGCTGGGTACCGGTCCGCGAGGACCTCTTCGCCGACCCCGAGCGGCACCAGCTGCGCTTCCTCGTGGCCTGGAACGACGTGGAGGGCAAGTTCGCTGTGACTTGTCACGACCGCACGGCGCAGCGGCGGCGGCGCGAGGGGAGCCAGCCCGGGCCCGAGCTGGTGTCCGAGCCCGTGTCCGAGGCCGCCGCGCCCCCGCCCAGCTGGGCAGGCCTGCTCTCGGCCGCCGGGCTCCGCGGCGCGCACCAGCAGCTGGCGGCGCTGTGGCCGCCGCTGGATCGCTGCTTCCCGCGGCTGCCGCCGGAGCTGGACGCGGGCGGCGGCGGGGCCTGGGGCCTGGGGCTCGGGCTGTGGACGCTGGTATGGCCGGCGCGCACGGAACCCGGCGAGGCGGCGTTGCAGGAGCTGTGCGGGCAGCTGGAGCGCTACCTGGGCCAGGCGGCCGACGGCTGCGGCGGCGCCGCGGTGCGCGACGCGCTCTTCCCTGCCGAGGGCTGCGCGGCCGACTGCGAGAGCCCGCGCGAGTTCCGGGAGCGGGCCCTGCGCGCTCGGCGGGACGAGGCGGGGGCGCGGCTGCGCCAGGTGCTTCAAGGGCATGAAAAAGCCAACACCATGGTAGCATTAATGAAAGTGTATCGAGAGGAAGATGAAGCATACCAGGAATTAGTTACTGCGGCAACCCTGTTCTTCCAGTATTTACTGCAGCCATTCAGGGATATGCGAGAACTTGCAACTTCATGTAAGCTTGCTATTTTGGGATGTTTTGCAGGAATGCAGAAACAAATGGCACAGGATGAGAAGAGATTTGGTCAGGCTGCCTGGGCCACAGCAACTCCCAGGTTAGAAAAACTCAAGCTGATGTTAGCTCGGGAGACTCTGCAACTCATGAGAGCCAAAGAGTTGTGTTTAAATCACAAAAGAGCTGAAATTCAGGGAAAGATGGAAGATCTTCCAGAACAAGAAAAAAAAATAAATGTTGTAGACGAATTAGAAATACAATATTATGAAGTTCAGTTAGAACTATACGAGGTTAAATTTGAGATATTAAAATATGAAGAAATACTGCTTGTTACACAGTTGGACTCTATTAAAAGACTTATAAAAGATAAACAGGATGAAGTTATCTATTACGATCCGTGTGAAAATCCAGAGGAACTTAAAGTCATGGATCGTGTAATGGGGCTGCAGGATGATAAGAATTTGGAGGTGAAGGAACTCAGCCGGCAGTGCCAGCAGCTGGAATCTAAACGGGGCAGGATCTGTGCCAGAAGAGCCCGTCTCAGGAACAGAAAGGATCACTGCAAAGAAAATCATCGACTCAGATTGCAACAGGCTGAAGAAAGCATAAAATATTTGCATCAGCATCATAGCGTTCAGAGGAAAAGAGACCAGAAAAAAGAGGAGGAGCAAAAGAAAAAAGAATGGATAAACCAAGAACGCCAAAAAACACTCCAACGATTGAGAGCATTTAAAGAGAGACGTCCAGGTCGCTCTGTCCTAAAGAGCTCTCGCTCACAACCTGTGGCTCCACACCTGCCGAGTGGACTTCCCCGGCAGACATCCCCGCCGACTTCTCAGATGACGGCGGTGATCCATCCGTCCTCTAGGAAAACCAGAAGCGCTCCCTTATCTGAAGTTAGTAACGTGATAACCCCTGAGCATGAAGACTGTGCTAGAAACATCCCTGTTCAGACTTTTGCTCCAGTTGGTGCCCAAACACACTCCAAATCAAGTGAGGAGTTGCCACTGCCTCCTCCTCCTCCTCCTCCTCCACCACCACCACCACCACCACCACCACCACCACCGCTGCCCCTCCCTGCTCCGCCCTTTTCTTCTCAATCTACAAATCATCGGAATTTACACTTCAGGACTTCAGCGAAAGATGATCAGCCGCATCCTCTAGTGTGTGAATCGCCCGCTGAGAGCCCGTGTGGTTCCTCAGACAGTTTTAGCTGCCCAGGGTCGATGGATGAAGTGCTGGCCTCCTTAAGGCATGACAGGGCCCCTCTCCAGAAGGTGCAAGCGCCCACGTTGTCCCCTCCCCGTGCCTCAGTCAATGAGCACATTCTGGCTGCCATAAGGCAAGGGGTCAAACTGAAGAAAGTTCACCCTGACCTTGGCCCGAGCCCCAGCAATAAACCCACCAGCGACCTGGAGAGGAGCATCAAGGCGGCGCTCCAGAGAATTAAGAGAGTATCTGCTGACTCGGAGGAGGAGGACGATCGTGATGAGCAGAACCCTGGCGAGTGGGACCGTTAG

Related Sequences

bmy_18685T0 Protein

Length: 763 aa      View alignments
>bmy_18685T0
MEDEQPDSLEGWVPVREDLFADPERHQLRFLVAWNDVEGKFAVTCHDRTAQRRRREGSQPGPELVSEPVSEAAAPPPSWAGLLSAAGLRGAHQQLAALWPPLDRCFPRLPPELDAGGGGAWGLGLGLWTLVWPARTEPGEAALQELCGQLERYLGQAADGCGGAAVRDALFPAEGCAADCESPREFRERALRARRDEAGARLRQVLQGHEKANTMVALMKVYREEDEAYQELVTAATLFFQYLLQPFRDMRELATSCKLAILGCFAGMQKQMAQDEKRFGQAAWATATPRLEKLKLMLARETLQLMRAKELCLNHKRAEIQGKMEDLPEQEKKINVVDELEIQYYEVQLELYEVKFEILKYEEILLVTQLDSIKRLIKDKQDEVIYYDPCENPEELKVMDRVMGLQDDKNLEVKELSRQCQQLESKRGRICARRARLRNRKDHCKENHRLRLQQAEESIKYLHQHHSVQRKRDQKKEEEQKKKEWINQERQKTLQRLRAFKERRPGRSVLKSSRSQPVAPHLPSGLPRQTSPPTSQMTAVIHPSSRKTRSAPLSEVSNVITPEHEDCARNIPVQTFAPVGAQTHSKSSEELPLPPPPPPPPPPPPPPPPPPPLPLPAPPFSSQSTNHRNLHFRTSAKDDQPHPLVCESPAESPCGSSDSFSCPGSMDEVLASLRHDRAPLQKVQAPTLSPPRASVNEHILAAIRQGVKLKKVHPDLGPSPSNKPTSDLERSIKAALQRIKRVSADSEEEDDRDEQNPGEWDR*