Part of scaffold_1816 (Scaffold)

For more information consult the page for scaffold_1816 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PAMR1 ENSTTRG00000009130 (Bottlenosed dolphin)

Gene Details

peptidase domain containing associated with muscle regeneration 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008650, Bottlenosed dolphin)

Protein Percentage 62.12%
cDNA percentage 61.98%
Ka/Ks Ratio 0.34928 (Ka = 0.0442, Ks = 0.1266)

PAMR1 ENSBTAG00000012630 (Cow)

Gene Details

inactive serine protease PAMR1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016767, Cow)

Protein Percentage 91.58%
cDNA percentage 90.64%
Ka/Ks Ratio 0.15698 (Ka = 0.0509, Ks = 0.3243)

PAMR1  (Minke Whale)

Gene Details

peptidase domain containing associated with muscle regeneration 1

External Links

Gene match (Identifier: BACU008903, Minke Whale)

Protein Percentage 95.46%
cDNA percentage 95.97%
Ka/Ks Ratio 0.3347 (Ka = 0.0304, Ks = 0.0909)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1392 bp    Location:103300..116620   Strand:+
>bmy_18687
ATGGATAGAGGAAGTCTTAGAATTCTCTTCAAAAGCATCATAGGAGAGGTCCTTGAAGAAAGAAACTGCTCAGACCCTGGGGACCCAGTCAATGGGTACAAGAAAATTACAGGAGGCCCTGGGCTTATCAATGGGCGCTATGCAAAAATTGGCACCGTCTTGACCTTCTTTTGTAACAACTCCTATGTTCTTAGCGGCAATGAGATGAGAACTTGCCAGCAGAATGGAGAGTGGTCAGGGAAACAACCCATCTGCATAAAAGCCTGTCGAGAACCAAAGATCTCAGACCTGGTGAGACGGAGAGTTCTTCCAATGCAGGTTCAGTCAAGGGAGACGCCATTACACCAGCTATACTCGTCAGCCTTCAGCAAGCAGAAGCTGCAGGACGCCTCTACCAAGAAGCCAGCCCTTCCCTTTGGAGACCTGCCCCCTGGGTACCAATATCTGCACACCCAGATCCAGTATGAGTGCATCTCACCCTTCTACCGCCGCCTGGGCAGCAGCCGGAGGACATGTCTGAGGACTGGGAAGTGGAGTGGGCGTGCCCCGTCCTGCATCCCTATCTGTGGGAAAACTGAGAACGTCACTGCTCCGAAGACGCAGAGGACGCGCTGGCCGTGGCAGGCTGCCATCTACAGGAGGGCCGGTGGGGTGCACGGGAGCAGCCTGCACAAGGACACGTGGTTCCTCGTCTGCAGCGGTGCCCTGGTCAATGAGCGCACCGTGGTGGTGGCTGCCCACTGCGTCACCGACCTGGGGAGGGTCACCGTGATCAAGACAGCAGACCTCAAAGTCGTCCTGGGGAAATTCTACAGGGATGATGACCGGGAAGAAAAAAGCATCCAGAGCTTGCGGATTTCTGCAATCATCCTGCATCCCAACTACGACCCCATCCTGCTGGATGCGGACATCGCCGTCCTGAAGCTCCTGGACAAGGCTCGCATCAGCACCCGCGTCCAGCCCATCTGCCTGGCAGCCCCTCGGGACCTCAGCACCTCCTTCCAGGAGTCCCGCATCACTGTGGCAGGCTGGAATGTCCTGGCAGACGTGAGGAGCCCCGGCTTCAAGAATGACACGCTGCGCTCGGGGGTGGTCAGTGTGGCGGACTCGCTGCTGTGCGAGGAGCAGCACGAGGAGCACGGCATCCCGGTGAGCGTCACAGACAACATGTTCTGTGCCGGCTGGGACCGCACTGCCCCCTCTGATATCTGCACAGCAGAGACGGGGGGCATCGCCGCTGTGTTCTTCCCGGGACGGGCGTCCCCTGAGCCCCGCTGGCATCTGGTGGGGCTGGTCAGCTGGAGCTATGACAAAACATGCAGCCACAGCCTCTACACAGCCTTCACCAAAGTGCTGCCTTTCAAAGACTGGATCGAGAGAAACATGAAATGA

Related Sequences

bmy_18687T0 Protein

Length: 464 aa      View alignments
>bmy_18687T0
MDRGSLRILFKSIIGEVLEERNCSDPGDPVNGYKKITGGPGLINGRYAKIGTVLTFFCNNSYVLSGNEMRTCQQNGEWSGKQPICIKACREPKISDLVRRRVLPMQVQSRETPLHQLYSSAFSKQKLQDASTKKPALPFGDLPPGYQYLHTQIQYECISPFYRRLGSSRRTCLRTGKWSGRAPSCIPICGKTENVTAPKTQRTRWPWQAAIYRRAGGVHGSSLHKDTWFLVCSGALVNERTVVVAAHCVTDLGRVTVIKTADLKVVLGKFYRDDDREEKSIQSLRISAIILHPNYDPILLDADIAVLKLLDKARISTRVQPICLAAPRDLSTSFQESRITVAGWNVLADVRSPGFKNDTLRSGVVSVADSLLCEEQHEEHGIPVSVTDNMFCAGWDRTAPSDICTAETGGIAAVFFPGRASPEPRWHLVGLVSWSYDKTCSHSLYTAFTKVLPFKDWIERNMK*