Part of scaffold_1816 (SequenceType object (1))

For more information consult the page for scaffold_1816 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PAMR1ENSTTRG00000009130 (Bottlenosed dolphin)

Gene Details

peptidase domain containing associated with muscle regeneration 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008650, Bottlenosed dolphin)

Protein Percentage 62.12%
cDNA percentage 61.98%
Ka/Ks Ratio 0.34928 (Ka = 0.0442, Ks = 0.1266)

PAMR1ENSBTAG00000012630 (Cow)

Gene Details

inactive serine protease PAMR1 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000016767, Cow)

Protein Percentage 91.58%
cDNA percentage 90.64%
Ka/Ks Ratio 0.15698 (Ka = 0.0509, Ks = 0.3243)

PAMR1 (Minke Whale)

Gene Details

peptidase domain containing associated with muscle regeneration 1

External Links

Gene match (Identifier: BACU008903, Minke Whale)

Protein Percentage 95.46%
cDNA percentage 95.97%
Ka/Ks Ratio 0.3347 (Ka = 0.0304, Ks = 0.0909)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 1392 bp    Location:103300..116620   Strand:+
>bmy_18687
ATGGATAGAGGAAGTCTTAGAATTCTCTTCAAAAGCATCATAGGAGAGGTCCTTGAAGAAAGAAACTGCTCAGACCCTGGGGACCCAGTCAATGGGTACAAGAAAATTACAGGAGGCCCTGGGCTTATCAATGGGCGCTATGCAAAAATTGGCACCGTCTTGACCTTCTTTTGTAACAACTCCTATGTTCTTAGCGGCAATGAGATGAGAACTTGCCAGCAGAATGGAGAGTGGTCAGGGAAACAACCCATCTGCATAAAAGCCTGTCGAGAACCAAAGATCTCAGACCTGGTGAGACGGAGAGTTCTTCCAATGCAGGTTCAGTCAAGGGAGACGCCATTACACCAGCTATACTCGTCAGCCTTCAGCAAGCAGAAGCTGCAGGACGCCTCTACCAAGAAGCCAGCCCTTCCCTTTGGAGACCTGCCCCCTGGGTACCAATATCTGCACACCCAGATCCAGTATGAGTGCATCTCACCCTTCTACCGCCGCCTGGGCAGCAGCCGGAGGACATGTCTGAGGACTGGGAAGTGGAGTGGGCGTGCCCCGTCCTGCATCCCTATCTGTGGGAAAACTGAGAACGTCACTGCTCCGAAGACGCAGAGGACGCGCTGGCCGTGGCAGGCTGCCATCTACAGGAGGGCCGGTGGGGTGCACGGGAGCAGCCTGCACAAGGACACGTGGTTCCTCGTCTGCAGCGGTGCCCTGGTCAATGAGCGCACCGTGGTGGTGGCTGCCCACTGCGTCACCGACCTGGGGAGGGTCACCGTGATCAAGACAGCAGACCTCAAAGTCGTCCTGGGGAAATTCTACAGGGATGATGACCGGGAAGAAAAAAGCATCCAGAGCTTGCGGATTTCTGCAATCATCCTGCATCCCAACTACGACCCCATCCTGCTGGATGCGGACATCGCCGTCCTGAAGCTCCTGGACAAGGCTCGCATCAGCACCCGCGTCCAGCCCATCTGCCTGGCAGCCCCTCGGGACCTCAGCACCTCCTTCCAGGAGTCCCGCATCACTGTGGCAGGCTGGAATGTCCTGGCAGACGTGAGGAGCCCCGGCTTCAAGAATGACACGCTGCGCTCGGGGGTGGTCAGTGTGGCGGACTCGCTGCTGTGCGAGGAGCAGCACGAGGAGCACGGCATCCCGGTGAGCGTCACAGACAACATGTTCTGTGCCGGCTGGGACCGCACTGCCCCCTCTGATATCTGCACAGCAGAGACGGGGGGCATCGCCGCTGTGTTCTTCCCGGGACGGGCGTCCCCTGAGCCCCGCTGGCATCTGGTGGGGCTGGTCAGCTGGAGCTATGACAAAACATGCAGCCACAGCCTCTACACAGCCTTCACCAAAGTGCTGCCTTTCAAAGACTGGATCGAGAGAAACATGAAATGA

Related Sequences

bmy_18687T0 SequenceType object (3)

Length: 464 aa      View alignments
>bmy_18687T0
MDRGSLRILFKSIIGEVLEERNCSDPGDPVNGYKKITGGPGLINGRYAKIGTVLTFFCNNSYVLSGNEMRTCQQNGEWSGKQPICIKACREPKISDLVRRRVLPMQVQSRETPLHQLYSSAFSKQKLQDASTKKPALPFGDLPPGYQYLHTQIQYECISPFYRRLGSSRRTCLRTGKWSGRAPSCIPICGKTENVTAPKTQRTRWPWQAAIYRRAGGVHGSSLHKDTWFLVCSGALVNERTVVVAAHCVTDLGRVTVIKTADLKVVLGKFYRDDDREEKSIQSLRISAIILHPNYDPILLDADIAVLKLLDKARISTRVQPICLAAPRDLSTSFQESRITVAGWNVLADVRSPGFKNDTLRSGVVSVADSLLCEEQHEEHGIPVSVTDNMFCAGWDRTAPSDICTAETGGIAAVFFPGRASPEPRWHLVGLVSWSYDKTCSHSLYTAFTKVLPFKDWIERNMK*