Sequence detailsbmy_18688 (Coding sequence)

Part of scaffold_1816 (SequenceType object (1))

For more information consult the page for scaffold_1816 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC1A2ENSTTRG00000009090 (Bottlenosed dolphin)

Gene Details

solute carrier family 1 (glial high affinity glutamate transporter), member 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008626, Bottlenosed dolphin)

Protein Percentage 65.89%
cDNA percentage 66.91%
Ka/Ks Ratio 0.47287 (Ka = 0.0331, Ks = 0.07)

SLC1A2ENSBTAG00000012628 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000016762, Cow)

Protein Percentage 94.64%
cDNA percentage 92.14%
Ka/Ks Ratio 0.14952 (Ka = 0.0355, Ks = 0.2372)

Additional orthologs identified in other species via the OPTIC pipeline.

SLC1A2 (Human)   Slc1a2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1998 bp    Location:216154..272599   Strand:+
Raw sequence 
>bmy_18688
ATGCCGGAAGCAGTGGAGCCACCACGTTTGGGCAGGGCAGCTGGATCAAAACCACCGGCAGGGAAGGGCCAGCCCTGGGTGGTGCTGACCTGCCCCTTCCTGCCACCCACTGGGTTTTCTAATGCAGACACGGCTGTCTTGATGCTTGACACTTTCATTACATCATGTGGATCCTGCCAGAATGTCTGGTTTAAATACTTTGCCAACAACATGCCCAAGCAGGTGGAAGTACGGATGCACGACAGCCACCTCAGCTCGGAGGAGCCGAAGCCCCGGCATCTGGGGCTGCACTTGTGTGACAAGCTGGGGAAGAATCTCCTGCTCACGCTGACCGTGTTCGGTGTCGTCCTGGGGGCAGTATGTGGAGGGCTTCTTCGCTTGGCATCTCCTATCCACCCTGATGTGGTTATGTTAATAGCCTTCCCAGGGGATATACTCATGAGGATGCTAAAGATGCTCATTCTGCCTCTAATCATCTCCAGTTTAATCACAGGGTTGTCAGGCCTGGATGCTAAAGCCAGTGGCCGCTTAGGCACGAGAGCTATGGTATATTACATGTCCACGACCATCATCGCTGCGGTGCTGGGGGTCATCCTGGTATTGGCTATCCACCCGGGGAACCCCAAACTCAAGAAGCAGCTGGGGCCTGGGCAGAAGAACGATGAAGTGTCCAGCCTGGATGCCTTTCTGGACCTTATTCGAAATCTGTTCCCTGAAAACCTTGTCCAAGCCTGTTTTCAGCAGCGTTGCCCAGACCAAGGGGGCCATGAGCTGCCTGTAGCCATTCAGCTGGGGCTGCCCTTCTCCCTGCACAAGTGCATGTGGCCAGTGACAAAGAAAGTCCTGGTGGCCCCTCCATCAGACGAGGACAGCAATGCCACCAATGCTGTCCTCTCGCTGTTGAATGAGACTGTGACTGAGCCACCTGAGGAGACGCAGGTGGTTATCAAGAAGGGCCTGGAGTTCAAGGACGGCATGAATGTCTTAGGTCTGATAGGGTTTTTCATTGCTTTCGGCATTGCCATGGGGAAGATGGGCGAGCAGGCCAAGCTGATGGTGGAATTCTTCAACATTTTGAATGAGATTGTAATGAAACTAGTGATCATGATCATGTGGTACTCTCCCCTAGGTATCGCCTGCCTAATTTGTGGGAAGATCATTGCAATCAAGGACTTAGAAGTGGTTGCTAGACAACTGGGGATGTACATGATCACGGTGATTGTCGGCCTCATCATCCATGGGGGCATCTTTCTCCCCTTGATTTACTTTCTAGTGACCAGGAAAAACCCTTTCTCCTTTTTTGCTGGAATTTTCCAAGCTTGGATCACTGCCCTGGGTACCGCTTCCAGTGCCGGAACTTTGCCCGTCACCTTCCGTTGCCTGGAAGAAAATCTGGGGATTGATAAGCGTGTAACCAGATTTGTCCTACCAGTTGGAGCAACCATTAACATGGACGGTACAGCCCTTTATGAAGCCGTGGCCGCCATCTTTATAGCCCAGATGAATGGCGTCATCCTAGACGGAGGCCAGATTGTGACCGTAAGAGCCACGCTTACCTTGTTTGAGCCCTGTGATATATTCAGTGAATTGGATGTCATGATGGGGGGCCTCACGGCCACGCTGGCCAGCGTTGGTGCAGCCAGTATCCCCAGTGCTGGGCTCGTCACCATGCTCCTTATTCTGACGGCTGTGGGCTTGCCGACCGAGGACATCAGCCTGCTGGTGGCTGTGGATTGGCTGCTGATTAAAACAAAACAAAACAAACAGTCTGAGCTGGACACCATTGACTCCCAGCACCGAGTGCATGAAGATATTGAAATGACCAAGACTCAGTCCATTTATGATGACATGAAGAACCACAGGGAAAACAACTCCAACCAATGTGTCTATGCTGCACACAACTCTGTCATAGTAGATGAGTGCAAGGTAACTCTGGCAGCCAATGGAAAATCAGCCGACTGCAGTGTTGACGAAGAACCTTGGAAACGTGAAAAATAA

Related Sequences

bmy_18688T0 SequenceType object (3)

Length: 666 aa      View alignments
>bmy_18688T0
MPEAVEPPRLGRAAGSKPPAGKGQPWVVLTCPFLPPTGFSNADTAVLMLDTFITSCGSCQNVWFKYFANNMPKQVEVRMHDSHLSSEEPKPRHLGLHLCDKLGKNLLLTLTVFGVVLGAVCGGLLRLASPIHPDVVMLIAFPGDILMRMLKMLILPLIISSLITGLSGLDAKASGRLGTRAMVYYMSTTIIAAVLGVILVLAIHPGNPKLKKQLGPGQKNDEVSSLDAFLDLIRNLFPENLVQACFQQRCPDQGGHELPVAIQLGLPFSLHKCMWPVTKKVLVAPPSDEDSNATNAVLSLLNETVTEPPEETQVVIKKGLEFKDGMNVLGLIGFFIAFGIAMGKMGEQAKLMVEFFNILNEIVMKLVIMIMWYSPLGIACLICGKIIAIKDLEVVARQLGMYMITVIVGLIIHGGIFLPLIYFLVTRKNPFSFFAGIFQAWITALGTASSAGTLPVTFRCLEENLGIDKRVTRFVLPVGATINMDGTALYEAVAAIFIAQMNGVILDGGQIVTVRATLTLFEPCDIFSELDVMMGGLTATLASVGAASIPSAGLVTMLLILTAVGLPTEDISLLVAVDWLLIKTKQNKQSELDTIDSQHRVHEDIEMTKTQSIYDDMKNHRENNSNQCVYAAHNSVIVDECKVTLAANGKSADCSVDEEPWKREK*