Sequence details bmy_18689 (Coding sequence)

Part of scaffold_1816 (Scaffold)

For more information consult the page for scaffold_1816 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CD44 ENSBTAG00000011578 (Cow)

Gene Details

CD44 antigen precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015381, Cow)

Protein Percentage 89.81%
cDNA percentage 89.9%
Ka/Ks Ratio 0.17071 (Ka = 0.0526, Ks = 0.3081)

Additional orthologs identified in other species via the OPTIC pipeline.

CD44 (Human)   Cd44 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1428 bp    Location:390724..302310   Strand:-
Raw sequence 
>bmy_18689
ATGGACGCGTTCTGGAGGCGCGCAGCTTGGGGACTCTGCCTCGTGCAGCTGAGTCTGGCGCAGATCGATCTAAATATAACCTGCCGATACGCAGGTATATTCCATGTGGAGAAGAATGGTCGCTACAGCATCTCGAAGACTGAGGCTGCTGACCTCTGCAAGGCCTTCAATTGTACGCTGCCCACCATGGCCCAGATGGAGGCAGCCCTGCGTGTAGGGTTTGAGACCTGCAGGTACGGGTTCATAGATGGGCACGTGGTGATCCCCCGGATCCACCCCAATTCCGTCTGTGCTGCAAACAACACGGGAGTGTACATCCTTACATCCAATACCTCCCAGTATGACACGTATTGCTTCAATGCTTCAGCTCCCCTTGAAGAAGACTGTACCTCAGTCACAGACCTGCCCAATGCCTTTGAAGGACCAATTACCATAACTATTGTTAACCGTGATGGCACCCGGTACACCAAGAAAGGGGAATACAGAACTAACCCCGATGACATCAACCCCAGCACCACTCCCGAGGAGGACATGAGCAGTGGATCCTCCAGTGAGAGAAGCACTTCAGGGGGCTACAACATCTTCCACACCCATCTTCCAACCGTGTACCCAACCCTGGACCAAGATAGTCCCCGGGTCTCCAGCAACCCAGAGACTACCTCGACTACCACCCGGGCACCCCCTACTAGTACAACAGAAGAAACAGCTACCCAGAAAGAGCAGTGGTTTGAGAATGGATGGCCTGGGGAAAATCCCCAAATGCCAAAAGAAGACTCTCATTCAACAGCAGGGACAACTGATAGGAATGATGACAGAGGTGGCAGAAGAGGTGGAAATCTTCCTGAAGACTCAACTACTTCAGTGGAAGGTTATACTCCTTATTCTCCAGACACAAATGAATACAGAACCCTCATCCCAGTGACCCCTGCTAAGACTGGGTCCCCTGAAGTTACTGAAGTTACTATTGTTGGAGAGTCTACTTCTAATGTTGATCTTTCTTTACCAGAAGACCAAGACTTATCCCATGACCCCAGCGGGAGGTCCTATACAACTCATGGATCCGAATCAGCTGGGCACTCAAGTGGGAGTCAGGAACGTGGGACAAACACAACCTCAGGTCCTATGCGGAAACCTCAAATTCCAGAATGGCTGATCATCTTGGCATCTCTCTTGGCCCTGGCTTTGATTCTTGCAGTTTGCATCGCTGTCAACAGTAGGAGAAGGTGTGGGCAGAAGAAAAAGCTGGTGATCAACAATGGCAATGGCACTGTGGAGGAGAGAAAGCCCAGCGGACTCAACGGAGAAGCTAGCAARTCTCAGGAGATGGTGCATTTRGTGAACAAGGAGTCGTCAGGGACCCCAGACCAGTTTATGACCGCAGATGAGAGGCGGAACCTGCAGAATGTGGACATGAAGATTGGGGTGTAA

Related Sequences

bmy_18689T0 Protein

Length: 476 aa      
>bmy_18689T0
MDAFWRRAAWGLCLVQLSLAQIDLNITCRYAGIFHVEKNGRYSISKTEAADLCKAFNCTLPTMAQMEAALRVGFETCRYGFIDGHVVIPRIHPNSVCAANNTGVYILTSNTSQYDTYCFNASAPLEEDCTSVTDLPNAFEGPITITIVNRDGTRYTKKGEYRTNPDDINPSTTPEEDMSSGSSSERSTSGGYNIFHTHLPTVYPTLDQDSPRVSSNPETTSTTTRAPPTSTTEETATQKEQWFENGWPGENPQMPKEDSHSTAGTTDRNDDRGGRRGGNLPEDSTTSVEGYTPYSPDTNEYRTLIPVTPAKTGSPEVTEVTIVGESTSNVDLSLPEDQDLSHDPSGRSYTTHGSESAGHSSGSQERGTNTTSGPMRKPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINNGNGTVEERKPSGLNGEASKSQEMVHLVNKESSGTPDQFMTADERRNLQNVDMKIGV*