Part of scaffold_1848 (Scaffold)

For more information consult the page for scaffold_1848 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IDH1 ENSTTRG00000016390 (Bottlenosed dolphin)

Gene Details

isocitrate dehydrogenase 1 (NADP+), soluble

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015534, Bottlenosed dolphin)

Protein Percentage 75.6%
cDNA percentage 75.68%
Ka/Ks Ratio 0.17147 (Ka = 0.0046, Ks = 0.0266)

IDH1 ENSBTAG00000020527 (Cow)

Gene Details

Isocitrate dehydrogenase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027348, Cow)

Protein Percentage 97.58%
cDNA percentage 95.09%
Ka/Ks Ratio 0.07842 (Ka = 0.0135, Ks = 0.1724)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1398 bp    Location:336033..353832   Strand:+
>bmy_18711
ATGCAGGCCAAGAGTCCGCTGGTCACAGCGTCCCCTAGGGACGTGCAAACCCCAAGACTAGCTAACGGACGACGAACCCGGGACTCCCCACGGGCGCACCCTCCAGTGTGTGCAGAGATATTTACTTTATTTGAAAGGTTTATTGAAGTCAAAATGTCTCAAAAAATCCAAGGCGGTTCTGTAGTAGAGATGCAAGGAGATGAAATGACACGAATCATTTGGGAGTTGATTAAAGAGAAACTTATTTTTCCCTATGTGGAATTGGACCTGCACAGCTATGATTTAGGCGTAGAGAATCGCGATGCCACCAATGACCAGGTCACCAAGGATGCTGCAGAAGCTATAAAGAAGTACAACGTTGGTGTCAAGTGTGCCACCATCACCCCCGATGAGAAGAGGGTGGAGGAGTTCAAGTTGAAACAAATGTGGAAATCACCAAATGGCACCATCCGAAATATTCTGGGTGGCACTGTGTTCAGAGAAGCTATTATCTGCAAAAACATCCCCCGGCTTGTGAGTGGATGGGTAAAACCCATCATCATAGGTCGTCATGCTTATGGCGATCAATACAGAGCAACTGATTTTGTTGTCCCGGGGCCTGGAAAAGTAGAGATATCCTACACGCCGAGCGATGGATCCCCCAAAACGACATACCTGGTACATAACTTCACAGAGGGTGGTGGTGTTGCCATGGGGATGTACAATCAAGATAAGGCAATTGAAGATTTTGCACACAGTTCTTTCCTGATGGCTCTGTCTAAGAATTGGCCTTTGTATCTGAGCACCAAAAACACTATTCTAAAGAAATATGATGGACGTTTTAAAGACATCTTTCAGGAGATATATGACAAGCAGTACAAATCTCAGTTTGAAGCTCAGAATATCTGGTACGAGCACAGGCTCATAGATGACATGGTGGCCCAAGCTATGAAATCAGAGGGAGGCTTCATCTGGGCCTGTAAAAACTATGATGGGGATGTGCAGTCGGACTCCGTGGCCCAAGGTTATGGCTCTCTTGGCATGATGACCAGTGTGCTGGTTTGTCCAGATGGCAAGACAGTAGAAGCAGAGGCTGCCCACGGGACTGTAACACGTCACTACCGAATGTACCAGAAAGGACAGGAGACATCCACCAATCCCATTGCTTCCATTTTTGCCTGGACCAGAGGCTTAGCCCACAGAGCTAAACTTGATAACAATAAAGACCTCAGCTTCTTTGCAAAGGTTTTGGAAGAAGTCTGTATTGAGACCATTGAGGCTGGCTTCATGACCAAGGACTTGGCTGCTTGTATTAAAGGTTTACCCAATGTGCAGCGTTCTGACTACTTGAATACATTTGAGTTCATGGATAAACTCGGAGAAAACTTGAAGACAAAACTAGCTCAGGCCAAACTTTAA

Related Sequences

bmy_18711T0 Protein

Length: 466 aa      View alignments
>bmy_18711T0
MQAKSPLVTASPRDVQTPRLANGRRTRDSPRAHPPVCAEIFTLFERFIEVKMSQKIQGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGVENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEISYTPSDGSPKTTYLVHNFTEGGGVAMGMYNQDKAIEDFAHSSFLMALSKNWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSQFEAQNIWYEHRLIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAHGTVTRHYRMYQKGQETSTNPIASIFAWTRGLAHRAKLDNNKDLSFFAKVLEEVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMDKLGENLKTKLAQAKL*