Part of scaffold_1840 (Scaffold)

For more information consult the page for scaffold_1840 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SCNN1G ENSTTRG00000006083 (Bottlenosed dolphin)

Gene Details

sodium channel, non-voltage-gated 1, gamma subunit

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005755, Bottlenosed dolphin)

Protein Percentage 91.09%
cDNA percentage 94.16%
Ka/Ks Ratio 0.44243 (Ka = 0.0357, Ks = 0.0806)

BT.17819 ENSBTAG00000010163 (Cow)

Gene Details

amiloride-sensitive sodium channel subunit gamma

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013412, Cow)

Protein Percentage 88.33%
cDNA percentage 90.58%
Ka/Ks Ratio 0.21645 (Ka = 0.0609, Ks = 0.2814)

SCNN1G  (Minke Whale)

Gene Details

sodium channel, non-voltage-gated 1, gamma subunit

External Links

Gene match (Identifier: BACU018203, Minke Whale)

Protein Percentage 98.84%
cDNA percentage 98.9%
Ka/Ks Ratio 0.21792 (Ka = 0.0059, Ks = 0.0272)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2064 bp    Location:118609..143090   Strand:+
>bmy_18716
ATGCTCTCSCTGTACGAGGAGCAGAACAGAGCGTACCCGGATCGCGCACACGCTAGCCGCGGACCCTTCGGAACTGACTTGCCTGCCCCACCAAGTCCCATCTTCACCATGGCTGCTGGAGAGAAGATCAAAGCCAAAATCAAGAAGAATCTGCCCGTCAGGGGACCTCAGGCACCTACCATCAAAGAGCTGATGCAGTGGTACTGTCTGAACACCAACACCCACGGCTGCCGCCGCATCGTGGTATCCCGTGGCCGCCTCCGGCGCCTGCTCTGGATTCTGTTCACACTCACAGCCGTGGCCCTCATTTTCTGGCAGTGTGCCCTCCTCATCTCATCCTTCTACACCGTCTCTGTCTCCATCAAAGTCCACTTCCAGAAGCTGGATTTTCCTGCTGTCACCATCTGCAACATCAATCCTTACAGGTACAGTGCCGTGCAGGACCTTCTAGCCGATTTGGAAAAGGAGACCAGAGGGACCTTGAAGACCCTGTATGGCTTTTCAGAGATTACATCTCGGAAACGCCGAGAGGCAGAGTCCTGGAGTTCGGCCAGGGAGGGCACAGGGTCGAAATTCCTCAACCTGATCCCGCTGCTRGCTTTCGATAAGGGTGAGACAAGCAAGGCAAGGGACTTCCGCACAGGACGGAAGCGGAAAGTCAGTGGGAGAATCATTCACGAGGCATCAGACGTCATGCATGTCCATGAGTCCAAGGAGGTGGTGGGATTCCAGCTGTGTTCAAATGACACATCCAGCTGTGCAGTCTACACCTTCAGCTCGGGGGTTAATGCCATCCGGGAGTGGTACAAGCTGCACTACATGAACATCATGGCACAGGTGCCTCCGGAGAAGAAAATCAACATGAGCTACTCTGCTGAGGAGCTGCTGGTCACCTGCTTCTTTGATGGGGAGTCCTGTGATGCCAGGAACTTCACACGTTTCCACCATCCAATGTATGGGAATTGCTACACATTCAACAACGGACAAAATGAGACTATCCTCAGCACCTCCATGGGAGGCAGTGAATATGGGCTGCAGGTCATCTTGTACATAAACGAAGAGGAGTACAACCCCTTCCTGGTGTCCTCCACTGGAGCTAAGGTGATTGTCCATCGGCAGGATGAGTACCCCTTCATCGAGGATGTGGGAACAGAGATTGAGACGGCCATGGCCACCTCCATAGGGATGCACCTGACGGAGTCCTTCAAGCTGAGTGAGCCCTACAGCAAGTGCACGGAGGACTGGAGTGACGTGCTGATCACGAACATCTACAATGCTACGTATTCCCTCCAGATCTGCCTTCACTCGTGCTTCCAGGCAAAGATGGTGGAGAAATGTGGGTGTGCCCAGTTCAGCCAGCCTCTACCTCGGGGAGCCAACTACTGCAACTACCAGCAGCACCCCAACTGGATGTACTGCTACTACGAACTGCACCAGGACTTTGTCCGGGAAGAGCTGGGCTGCCAGGTGCTGTGCAAGGAAGCCTGCAGCTTTAAGGAGTGGACGCTGACCACCAGTCTGGCGCAGTGGCCATCTGAGGTTTCCGAGAAATGGTTGCTGTCCGTTCTCACTTGGGACCAAGGCCAAATAAAGAAAAAACTCAACAAGACAGACTTGGCCAAACTCTTGATATTCTACAAAGACCTGAACCAGAGATCCATCGTGGAGAGCCCTGCCAACAGCATCGAGATGCTTCTGTCCAACATCGGTGGCCAGCTGGGCCTGTGGATGAGCTGCTCCGTCGTCTGCGTCATTGAGATCGTCGAGGTCTTCCTCGTCGACTCCCTCTCCATCGTCGCACGCCACCAATGGCGCAAAGCCAAGGAGTGGTGGGCCCGGAGACAGGCACCCCCCTGGCCCGAGGCTCCCCGCAGCCCTCAGGGCCGGGACAACCTGGGCCTCAATATAGACGATGACCTGCCTACTTTCACCTCTGCCTTGTGCCTGCCTCCAGCCCCAGCAGCCCAGGTGCCGGGCACGCCGCCCCCCAGATACAACACCTTGCGCTTGGAGAGGGACTTCCCCAGCCAGCTCGCGGACACTGAGGTGCCAGCTGAGTCCTGA

Related Sequences

bmy_18716T0 Protein

Length: 688 aa      View alignments
>bmy_18716T0
MLSLYEEQNRAYPDRAHASRGPFGTDLPAPPSPIFTMAAGEKIKAKIKKNLPVRGPQAPTIKELMQWYCLNTNTHGCRRIVVSRGRLRRLLWILFTLTAVALIFWQCALLISSFYTVSVSIKVHFQKLDFPAVTICNINPYRYSAVQDLLADLEKETRGTLKTLYGFSEITSRKRREAESWSSAREGTGSKFLNLIPLLAFDKGETSKARDFRTGRKRKVSGRIIHEASDVMHVHESKEVVGFQLCSNDTSSCAVYTFSSGVNAIREWYKLHYMNIMAQVPPEKKINMSYSAEELLVTCFFDGESCDARNFTRFHHPMYGNCYTFNNGQNETILSTSMGGSEYGLQVILYINEEEYNPFLVSSTGAKVIVHRQDEYPFIEDVGTEIETAMATSIGMHLTESFKLSEPYSKCTEDWSDVLITNIYNATYSLQICLHSCFQAKMVEKCGCAQFSQPLPRGANYCNYQQHPNWMYCYYELHQDFVREELGCQVLCKEACSFKEWTLTTSLAQWPSEVSEKWLLSVLTWDQGQIKKKLNKTDLAKLLIFYKDLNQRSIVESPANSIEMLLSNIGGQLGLWMSCSVVCVIEIVEVFLVDSLSIVARHQWRKAKEWWARRQAPPWPEAPRSPQGRDNLGLNIDDDLPTFTSALCLPPAPAAQVPGTPPPRYNTLRLERDFPSQLADTEVPAES*