Sequence detailsbmy_18724 (Coding sequence)

Part of scaffold_1845 (SequenceType object (1))

For more information consult the page for scaffold_1845 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GTF2A1ENSTTRG00000008254 (Bottlenosed dolphin)

Gene Details

general transcription factor IIA, 1, 19/37kDa

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007815, Bottlenosed dolphin)

Protein Percentage 76.0%
cDNA percentage 76.27%
Ka/Ks Ratio 0.39955 (Ka = 0.0201, Ks = 0.0504)

BT.87840ENSBTAG00000013652 (Cow)

Gene Details

transcription initiation factor IIA subunit 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000018145, Cow)

Protein Percentage 95.76%
cDNA percentage 93.28%
Ka/Ks Ratio 0.14175 (Ka = 0.0298, Ks = 0.2103)

Additional orthologs identified in other species via the OPTIC pipeline.

GTF2A1 (Human)   Gtf2a1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1185 bp    Location:322212..395169   Strand:+
Raw sequence 
>bmy_18724
ATGGAGGATCAAAAGGACGGTGCAGATCAGCCGGAACACTGCTCTGGAAGTTCCTCTGGCATCACCCAGCACAACAGTGGTGTGAAGCCTAAATTATACAGATCTGTGATTGAAGATGTAATTAATGATGTGAGAGACATCTTTTTGGATGATGGAGTCGATGAACAAGTTCTGATGGAACTAAAGACTTTATGGGAGAATAAACTAATGCAGTCTAGGGCAGTAGATGGATTTCATTCAGAAGAGCAGCAGCTTTTACTGCAAGTTCAACAGCAGCAGCAACCGCAGCAGCAGCAGCATCACCACCACCACCACCACCAGGCTCAACCGCAGCCAACAGTACCTCAGCAAGCGCAGACCCAGCAGGTCCTTATTCCTGCGTCACAGCAAGCTGCAGCACCACAAGTTATTGTTCCTGATTCTAAGCTGATACAACATATGAATGCATCAAACATGAGTGCTGCTGCTACAGCTGCTACCTTAGCGCTCCCTGCTGGTGTGACTCCTGTTCAACAGATATTAACAAATTCAGGCCAGCTTCTTCAAGTGGTCAGAGCAGCCAATGGTGCCCAGTATATCTTTCAGCCTCAGCAGTCAGTAGTTCTACAACAGCAGGTTATACCACAAATGCAGCCTGGTGGAGTACAAGCTCCTGTTATACAACAGGTACTGGCCCCTCTTCCTGGAGGGATTTCACCACAAACAGGTGTTATCATCCAGCCCCAGCAAATCTTATTTACAGGAAATAAGACTCAAGTTATACCTACAACGGTGGCAGCACCTACACCAGCACAAGCACAGCTAACCGCAGCTGGCCAACAGCAGCCACAGGCCCAGCCTGCTCAACAGCAAGCCCCACTGGTGTTGCAGGTTGATGGGACTGGGGATACGTCATCTGAAGAAGATGAAGATGAAGAAGAAGACTATGATGATGAGGAGGAAGAAGACAAAGAGAAAGATGGAGCTGAAGATGGGCAGGTAGAAGAGGAACCGCTCAATAGTGAAGATGATGTGAGTGATGAGGAAGGACAGGAACTCTTTGATACAGAAAATGTTGTTGTATGCCAATATGATAAGATACACAGAAGTAAAAACAAATGGAAATTTCATCTCAAGGATGGCATTATGAATCTTAATGGAAGAGATTATATATTTTCCAAAGCCATTGGAGATGCAGAATGGTGA

Related Sequences

bmy_18724T0 SequenceType object (3)

Length: 395 aa      View alignments
>bmy_18724T0
MEDQKDGADQPEHCSGSSSGITQHNSGVKPKLYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAVDGFHSEEQQLLLQVQQQQQPQQQQHHHHHHHQAQPQPTVPQQAQTQQVLIPASQQAAAPQVIVPDSKLIQHMNASNMSAAATAATLALPAGVTPVQQILTNSGQLLQVVRAANGAQYIFQPQQSVVLQQQVIPQMQPGGVQAPVIQQVLAPLPGGISPQTGVIIQPQQILFTGNKTQVIPTTVAAPTPAQAQLTAAGQQQPQAQPAQQQAPLVLQVDGTGDTSSEEDEDEEEDYDDEEEEDKEKDGAEDGQVEEEPLNSEDDVSDEEGQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIFSKAIGDAEW*