Part of scaffold_1856 (Scaffold)

For more information consult the page for scaffold_1856 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PDE1C ENSTTRG00000000353 (Bottlenosed dolphin)

Gene Details

phosphodiesterase 1C, calmodulin-dependent 70kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000332, Bottlenosed dolphin)

Protein Percentage 73.26%
cDNA percentage 72.96%
Ka/Ks Ratio 0.37029 (Ka = 0.0511, Ks = 0.1381)

PDE1C ENSBTAG00000002739 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003553, Cow)

Protein Percentage 92.86%
cDNA percentage 90.9%
Ka/Ks Ratio 0.1481 (Ka = 0.0438, Ks = 0.296)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1470 bp    Location:149641..196095   Strand:+
>bmy_18725
ATGGACAGATATAAGAAACTCAGCAAATGTATGTGCTCTCAAGACATGGTGTTGAAGGGTTTGGGGGACCTCACTTGGGTGCCCAGACCAAAAATCCTTTGGAATAGTATTAAAAAGCTAGATGTACAGACTGCAACTTACCGTGGGACCTGTCCTTGGGGACACTGGCCTTTTAGGTTACGGTCTTTGGTCAAGCAGTTAGAGAGAGGGGAGGCTTCAGTGGTAGATCTTAAGAAGAATTTGGAATATGCAGCCACAGTGCTTGAATCCGTATACATTGATGAAACCAGGAGACTCCTGGATACGGAGGATGAGCTCAGTGACATTCAGTCAGATGCGGTGCCTTCTGAGGTCCGAGACTGGCTGGCCTCCACCTTTACACGGCAGATGGGGATGATACTCAGAAGGAGTGAGGAGAAGCCACGGTTCAAGAGCATCGTCCACGCAGTGCAAGCTGGGATATTTGTGGAGAGAATGTATAGACGAACATCAAACATGGTTGGACTGAGCTACCCACCAGCTGTTATTGAAGCATTAAAGGATGTGGACAAGTGGTCCTTTGATGTCTTTTCCCTCAATGAAGCCAGCGGGGATCATGCACTGAAATTCATTTTCTATGAATTACTCACACGCTATGATCTGATCAGCCGTTTCAAGATCCCCATTTCTGCACTTGTCTCGTTTGTGGAGGCCCTGGAAGTAGGATACAGCAAGCACAAAAACCCTTACCACAATTTGATGCACGCTGCCGACGTTACACAGACTGTGCATTACCTCCTCTATAAGACAGGAGTAGCAGTCAAAAGATTCCAGACTCCAAACCTGTCCTCTGGCCCTTTCATTGCTTTTATCAGAAGGGAGAAGCTGTATCTTATTCTTTTGATCATATATGACATCATTTGGCATGCCGACCATGTTACTCTCTTGCATAACTGGCTGACAGAGCTGGAGATCTTTGCTATAATCTTCTCAGCTGCCATCCATGACTATGAGCACACCGGAACCACCAACAATTTCCACATTCAGACCCGGTCTGACCCAGCGATTCTGTACAACGATAGGTCTGTTTTGGAAAATCACCATTTAAGTGCAGCCTATCGCCTTCTACAGGAGGATGAGGAAATGAATATTTTGGTTAACCTCTCAAAGGATGATTGGAGGGAGTTTCGGACCTTGGTAATTGAGATGGTGATGGCTACGGATATGTCCTGTCATTTCCAGCAAATCAAAGCGATGAAGACTGCTCTGCAGCAGCCAGAAGCAATTGAAAAGCCGAAAGCATTATCCCTGATGTTGCACACGGCAGACATTAGCCATCCAGCAAAAGCCTGGGAGCTCCACCATCGCTGGACGATGTCACTCCTGGAGGAGTTCTTCAGACAGGTGCATAGAAGTAGAGAAATAAAAAGGAAAGCTTGTTTGCACAAACATAAGCTTGAATTGAAAGAAAATGTACCAGAGGCAATGTGA

Related Sequences

bmy_18725T0 Protein

Length: 490 aa      View alignments
>bmy_18725T0
MDRYKKLSKCMCSQDMVLKGLGDLTWVPRPKILWNSIKKLDVQTATYRGTCPWGHWPFRLRSLVKQLERGEASVVDLKKNLEYAATVLESVYIDETRRLLDTEDELSDIQSDAVPSEVRDWLASTFTRQMGMILRRSEEKPRFKSIVHAVQAGIFVERMYRRTSNMVGLSYPPAVIEALKDVDKWSFDVFSLNEASGDHALKFIFYELLTRYDLISRFKIPISALVSFVEALEVGYSKHKNPYHNLMHAADVTQTVHYLLYKTGVAVKRFQTPNLSSGPFIAFIRREKLYLILLIIYDIIWHADHVTLLHNWLTELEIFAIIFSAAIHDYEHTGTTNNFHIQTRSDPAILYNDRSVLENHHLSAAYRLLQEDEEMNILVNLSKDDWREFRTLVIEMVMATDMSCHFQQIKAMKTALQQPEAIEKPKALSLMLHTADISHPAKAWELHHRWTMSLLEEFFRQVHRSREIKRKACLHKHKLELKENVPEAM*