Part of scaffold_1862 (Scaffold)

For more information consult the page for scaffold_1862 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LEO1 ENSTTRG00000016252 (Bottlenosed dolphin)

Gene Details

Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015407, Bottlenosed dolphin)

Protein Percentage 90.81%
cDNA percentage 90.34%
Ka/Ks Ratio 0.16865 (Ka = 0.0207, Ks = 0.1225)

LEO1 ENSBTAG00000013830 (Cow)

Gene Details

RNA polymerase-associated protein LEO1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018400, Cow)

Protein Percentage 82.32%
cDNA percentage 83.61%
Ka/Ks Ratio 0.25669 (Ka = 0.1404, Ks = 0.5469)

LEO1  (Minke Whale)

Gene Details

Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)

External Links

Gene match (Identifier: BACU016369, Minke Whale)

Protein Percentage 97.53%
cDNA percentage 97.11%
Ka/Ks Ratio 0.2197 (Ka = 0.0179, Ks = 0.0815)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2094 bp    Location:97710..143731   Strand:+
>bmy_18737
ATGGCGGATATGGAGGACCTTTTCGGGAGCGACGCCGACAGCGATGCTGAGCGTAAAGGTGGGGTAGGCTGGGCTTGGGGGGAGGCGAGCGTGGCGGGGCTTTTGCGGCGGGAGCTCGACAGCGGTCCGGTTCCGGGTCTGCGAGCGCTCCGGCGCCGCGGGCGAGTGGTGGCTCTTCCTCCACTCCTGCTTCAGCTCCCCCTGCACTCCCGGCGGTGCCAGCCTCCCCCCACCGAGGGCGGGAATGAAGTGACAGACGCAGAGTGTGTACCTCGAGGTTCTTGGTGTCCATGGAACAAGCCGTGCCTGGGAGCGTGTGGAGCGAAGGGGGCGCGGGGCAGGGGTGGAGGCCGGGCGAGCCAGCGCAGCCGGAGGAGGAACCTTGGAGTCCTGCTCTGTCCTGCCTTGCACAGGCCAGCGCAGAAGCGTGGCGTGTTGGGGAGTTTGAGATGTCTGGGTGAGGAGATTGGGAAGGATACCGAGGTTACTGTTGGTCCTGAACGTAGGATGGATGTGGCAAGTGAAAGTGATCAAGATGAAAGAGATGACTCAGGAAAACCAAGTAATAAGGAACTGTTTGGAGATGACAGTGAGGATGAGGGAGCTTCTCATCATAGTGGGAGTGATAATCACTCTGAAGGATCAGACAATAGATCAGAAGCTTCTGAGCATTCTGACCATGAAGACAATGATCCCTCAGATGTAGATCAGCACAGTGGATCAGAAGCCCACAATGACGATGACGATGAAGGTCATAGATCAGATGGAGGGAGCCATCACTCAGAAGCGGAAGGTTCTGAAAAAGCACATTCAGATGATGAAAAATGGGGCAGAGAAGATAAAAGTGACCAGTCAGATGATGAAAAGATACAAAATTCTGATGATGAGGAGAGGGCACAAGGATCTGATGAAGATAAACTGCAGAATTCTGATGATGATGAGAAAATGCAGAACRCAGATGATGAGGAGAGGCCTCAGCTTTCAGATGATGAGAGACAACAACTGTCTGAGGAGGAGAAGGCTAATTCGGATGATGAACGGCCAGCAGCTTCTGATAATGATGATGAGAAACAGAATTCTGATGATGAAGAGCGGCCACAGATGTCTGATGACGAGAAAATGCAAAATTCTGATGATGAAAGGCCACAGGCCTCGGATGAAGAACACAGGCATTCAGATGATGAAGAGGAACAGGACCATAAGTCAGAATCTGCAAGAGGCAGTGATAGTGAAGATGAAGTTTTACGAATGAAACGCAAGAATGCAATTGCATCTGATTCAGAAGCAGATAGTGACACTGAGGTACCAAAAGATAATAGTGGAACCATGGATCTCTTTGGAGGTGCAGATGATATATCTTCAGGGAGTGATGGGGAAGATAAACCACCCACTCCAGGACAGCCTGTTCTGCCCAACTTTCTCAGTGTGGAGCCCAGACCTTTTGATCCTCAATATTATGAAGATGAATTTGAAGATGAGGAAATGCTGGATGAAGAAGGTCGAACCAGGTTAAAATTAAAGGTAGAAAATACTATAAGATGGAGGATACGCCGGGATGAAGAAGGAAATGAAATTAAAGAAAGCAATGCTCGGATAGTCAAGTGGTCCGATGGAAGCATGTCCCTGCATTTAGGCAATGAGGTGTTTGATGTTTACAAGGCTCCACTGCAGGGTGATCACAACCACCTTTTTATAAGACAAGGTACCGGTCTACAGGGACAAGCCGTCTTTAAAACCAAACTCACATTCAGGGAATCTCAGCAGCGCCGCATGAGAGAGAAACAGCACCAGCGGGGGCTGAGTGCTAGCTACCTAGAACCTGATCGATATGATGAGGAGGAGGAAGGTGAGGAGTCCATCAGCTTGGCTGCCATTAAAAACCGATACAAAGGAGGCATTCGAGAGGAACGAGCCAGAATCTATTCATCAGACAGTGATGAGGGATCAGAAGAAGATAAGGCTCAAAGATTACTCAAAGCAAAGAAACTCACCAGTGAGCCTTCTGGAAAGAGAAAAGCAGAAGATGACGATAAAGCAAATAAAAAGCACAARAAGTACGTGATCAGTGATGAAGAGGAAGAAGATGACGATTGA

Related Sequences

bmy_18737T0 Protein

Length: 698 aa      View alignments
>bmy_18737T0
MADMEDLFGSDADSDAERKGGVGWAWGEASVAGLLRRELDSGPVPGLRALRRRGRVVALPPLLLQLPLHSRRCQPPPTEGGNEVTDAECVPRGSWCPWNKPCLGACGAKGARGRGGGRASQRSRRRNLGVLLCPALHRPAQKRGVLGSLRCLGEEIGKDTEVTVGPERRMDVASESDQDERDDSGKPSNKELFGDDSEDEGASHHSGSDNHSEGSDNRSEASEHSDHEDNDPSDVDQHSGSEAHNDDDDEGHRSDGGSHHSEAEGSEKAHSDDEKWGREDKSDQSDDEKIQNSDDEERAQGSDEDKLQNSDDDEKMQNXDDEERPQLSDDERQQLSEEEKANSDDERPAASDNDDEKQNSDDEERPQMSDDEKMQNSDDERPQASDEEHRHSDDEEEQDHKSESARGSDSEDEVLRMKRKNAIASDSEADSDTEVPKDNSGTMDLFGGADDISSGSDGEDKPPTPGQPVLPNFLSVEPRPFDPQYYEDEFEDEEMLDEEGRTRLKLKVENTIRWRIRRDEEGNEIKESNARIVKWSDGSMSLHLGNEVFDVYKAPLQGDHNHLFIRQGTGLQGQAVFKTKLTFRESQQRRMREKQHQRGLSASYLEPDRYDEEEEGEESISLAAIKNRYKGGIREERARIYSSDSDEGSEEDKAQRLLKAKKLTSEPSGKRKAEDDDKANKKHKKYVISDEEEEDDD*