Sequence details bmy_18745 (Coding sequence)

Part of scaffold_1851 (Scaffold)

For more information consult the page for scaffold_1851 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MECP2 ENSTTRG00000004653 (Bottlenosed dolphin)

Gene Details

methyl CpG binding protein 2 (Rett syndrome)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004362, Bottlenosed dolphin)

Protein Percentage 98.98%
cDNA percentage 98.73%
Ka/Ks Ratio 0.12385 (Ka = 0.0045, Ks = 0.0365)

MECP2 ENSBTAG00000047855 (Cow)

Gene Details

methyl-CpG-binding protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000056184, Cow)

Protein Percentage 98.22%
cDNA percentage 94.74%
Ka/Ks Ratio 0.03343 (Ka = 0.0079, Ks = 0.2357)

MECP2  (Minke Whale)

Gene Details

methyl CpG binding protein 2 (Rett syndrome)

External Links

Gene match (Identifier: BACU011423, Minke Whale)

Protein Percentage 65.9%
cDNA percentage 74.47%
Ka/Ks Ratio 0.83115 (Ka = 0.311, Ks = 0.3742)

Additional orthologs identified in other species via the OPTIC pipeline.

MECP2 (Human)   Mecp2 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1182 bp    Location:98885..102628   Strand:+
Raw sequence 
>bmy_18745
ATGTACGACGACCCCACTCTGCCTGAAGGTTGGACCCGAAAGCTTAAGCAAAGGAAATCTGGCCGCTCCGCTGGGAAGTATGATGTGTATTTGATCAATCCCCAGGGAAAAGCCTTTCGCTCTAAAGTGGAGCTGATTGCGTACTTCGAAAAGGTAGGCGACACCTCCCTGGACCCTAATGATTTTGACTTCACGGTAACTGGGAGAGGGAGCCCCTCCCGGCGAGAGCAGAAACCACCTAAGAAGCCCAAATCTCCCAAAGCTCCAGGAACTGGCAGAGGTCGGGGACGCCCCAAAGGGAGCGGCACCACGAGACCCAAGGCAGCAACATCAGAGGGCGTGCAGGTGAAAAGGGTCCTGGAGAAAAGCCCCGGGAAGCTGCTCGTCAAGATGCCTTTCCAAGCTTCGCCGGGCAGTAAGGCCGAAGGGGGTGGGGCCACCACGTCGGCCCAGGTCATGGTTATCAAACGCCCCGGCCGGAAGCGAAAAGCTGAGGCTGACCCCCAGGCCATTCCCAAGAAACGGGGCCGAAAGCCGGGCAGTGTGGTGGCGGCTGCCGCCGCCGAGGCCAAGAAGAAAGCCGTGAAGGAGTCTTCCATCCGGTCTGTGCAGGAGACCGTGCTGCCCATCAAGAAGCGTAAGACCCGGGAGACGGTGAGCATCGAGGTGAAGGAGGTGGTGAAGCCCCTGCTGGTGTCCACCCTTGGCGAGAAGAGCGGGAAGGGACTGAAGACCTGCAAGAGCCCCGGGCGGAAAAGCAAGGAGAGCAGCCCCAAGGGGCGCAGCGGCAGCGCCTCCTCGCCCCCCAAGAAGGAGCACCACCACCACCACCACCACGCGGAGCCCCCGAAGGCGCCCGCGCCACTGCTCCCGCCCCCGCCCCCGCCCCCACCGGAGCCCCAGAGCTCCGAGGACCCCGCCAGCCCMCCCGAGCCCCAGGACTTGAGCAGCAGCGTCTGCAAAGAGGAGAAGATGCCGAGAGCAGGCTCGCTGGAGAGCGACGGCTGCCCCAAGGAGCCAGCTAAGACTCAGCCCGCGCTCACGACCGCCGCCACGGCCACAGAAAAGTACAAACACCGAGGGGAGGGAGAGCGCAAAGACATTGTCTCATCCTCCATGCCAAGGCCAAACAGAGAGGAGCCTGTGGACAGCCGGACGCCCGTGACCGAGAGAGTGAGCTGA

Related Sequences

bmy_18745T0 Protein

Length: 394 aa      View alignments
>bmy_18745T0
MYDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELIAYFEKVGDTSLDPNDFDFTVTGRGSPSRREQKPPKKPKSPKAPGTGRGRGRPKGSGTTRPKAATSEGVQVKRVLEKSPGKLLVKMPFQASPGSKAEGGGATTSAQVMVIKRPGRKRKAEADPQAIPKKRGRKPGSVVAAAAAEAKKKAVKESSIRSVQETVLPIKKRKTRETVSIEVKEVVKPLLVSTLGEKSGKGLKTCKSPGRKSKESSPKGRSGSASSPPKKEHHHHHHHAEPPKAPAPLLPPPPPPPPEPQSSEDPASPPEPQDLSSSVCKEEKMPRAGSLESDGCPKEPAKTQPALTTAATATEKYKHRGEGERKDIVSSSMPRPNREEPVDSRTPVTERVS*