Part of scaffold_1851 (Scaffold)

For more information consult the page for scaffold_1851 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PDZD4 ENSTTRG00000003180 (Bottlenosed dolphin)

Gene Details

PDZ domain containing 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002981, Bottlenosed dolphin)

Protein Percentage 96.56%
cDNA percentage 96.95%
Ka/Ks Ratio 0.10549 (Ka = 0.0144, Ks = 0.1361)

PDZD4 ENSBTAG00000021422 (Cow)

Gene Details

PDZ domain-containing protein 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028557, Cow)

Protein Percentage 93.0%
cDNA percentage 91.33%
Ka/Ks Ratio 0.05578 (Ka = 0.0306, Ks = 0.5493)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2292 bp    Location:313113..318977   Strand:+
>bmy_18755
ATGTCTCTGCTGCAGGTGAACGGGAAGGAGCTCTCCAAGCTGTCTCAGGAGCAGACCCTGGAGGCCCTGCGTGCCTCCAAGGAGCCCCTGGTGATCCAGGTGCTGAGACGCAGTCCCCGCCTCCGGGGGGATGGCTCCTCCCACGACCTGCAGCTGGTGGACAGTGGCACTCAGACCGACATCACCTTCGAGCATATCATGGCGCTGGGCAAGCTGCGCCCACCCACCCCGCCCATGGTCATCCTGGAGCCGTACGTCCCATCTGAGCTCCCCCCCATCAGCCATGAGTATTATGACCCGGCGGAGTTCATGGAGGGCGGCCCACAGGAGGCAGACCGTATGGATGAGCTGGAGTATGAGGAGGTGGAGCTGTATAAAACCAGCCACCGGGACAAGCTGGGCCTGATGGTCTGTTACCGCACGGATGACGAGGAGGACCTGGGCATCTATGTTGGAGAGGTGAATCCCAACAGCATCGCAGCCAAAGACGGCCGCATCCGCGAAGGAGACCGCATCATCCAGATAAATGGTGTGGACGTCCAGAACCGGGAAGAGGCAGTGGCCATCCTGAGCCAGGAGGAGAATACCAACATCTCCCTGCTGGTGGCCCGGCCTGAGAGCCAGCTGGCGAAGCGGTGGAAGGACAGTGACCGGGACGACTTCCTGGACGATTGTGGCTCTGAGAACGAGGGGGACCTGCGGGCGCGGAAGCTGAAATCCCCCCCTGCCCAGCAGCTCCAGCTTGGAAACGAAGAGGAGAAAGGGGCCCCTGATGCGGGCCCAGGCTTGAGCAACAGCCAGGAGCTGGACAGTGGGGTGGGCCGGACGGATGAGAGCACGCGCAACGAGGAGAGCTCCGAGCACGACCTGCTGGGGGACGAGCCCCTGAGTACCGCCAACACGCCCGGGCCCCTGCGCAAGTTTGGCCTGCAAGGGGACGCCCTGCAGAGCCGCGACTTCCACTTTAGCATGGACTCCCTGCTGGCCGAGGGCGCAGGGCTGGGTGGCGGCGACGTGCCGGGCCTCACGGATGAGGAGTACGAGCGCTACCGCGAGCTGCTGGAGATCAAGTGCCACCTGGAGAATGGCAACCCCCTGGGCCTCCTCTTTCCCCGGGCCGCCGGCGGCAACGGCGCCCTGGATGTCAACCGCAACGAGAGCGTGGGCCACGAGATGGCCGTGCTGGAGGAGGAGCTGCGGCACCTGGAGTTCAAGTGCCGCAACATCCTGCGGGCGCAGAAGATGCAACAGCTGCGCGAGCGCTGCATGAAGGCCTGGCTGCTGGAGGAGGAGAGCCTCTACGACCTGGGGGCCGGCGAGCCCAAGAAGCACGAGCTGTCTGACATCTCCGAGCTGCCTGAGAAGTCGGACAAGGACAGCACCAGCGCCTACAACACGGGTGAGAGCTGCCGCAGCACCCCGCTGCTGGCGGAGCCCCTGCCCGAGAGCCCCCTGAGGCGGGCGACTGCCGGGGGCAACTCCAACCTGAACCGGACCCCCTCCGGACACCCTGTCGCCGCCCACCCCAAGGCTGCCCCTCCGCAGGGGAGTCCCGCCAAGTTCCGATCCCTCTCCCGGGATCCCGAGGTGGGCCGGAGACAGCGCTCGGAGGAGCGGGTCCGCCGCGGCCCCAAGACGGGGGTGACCCTGGAGCGCGTGGGCCCCGAAGGCAGCCCTTACCTGTCGCGGCGCCATCGCGGCCAGGGCCAGGAGGGCGAGCGCTACCACAGCTGCGTGCAGCTGGCCCCGCCGCGCGGTCTGGAAGAGCTGGGCCACGGCGCCTTGAGTTTGGCCAGTGGCCCTCGGGTGGGTGGGGCGGCGGCGGCGGCGGCCACCGAAGCGCCCCGCATGGAGTGGAAAGTCAAGGTGCGCAGCGACGGGACCCGCTACGTGGCCAAGCGGCCGGTGCGGGACCGCCTCCTGAAAGCCCGGGCCCTGAAGATCCGGGAGGAGCGCAGCGGCATGACCACCGACGACGACGCGGTGAGCGAGATGAAGATGGGCCGCTACTGGAGCAAGGAGGAGCGGAAGCAGCACCTGCTGCGGGCCCGGGAGCAGCGGAGGCGGCGCGAGTTCATGCTGCAGAGCCGCCTCGAGTGCCTGAGGGAGCAGAGCGGCGACAGCAGGGCTGAGCTCAACATCATCGCGCTGAGCCACCGCAAAACCATGAAGAAGCGGAGCAAGAAGATCCTGGACAACTGGATCACCATCCAGGAGATGCTGGCCCACGGCACGCGCTCGGCCGACGGGAAGCGCGTCTACAACCCTCTGCTCTCCGTCACCACCGTCTGA

Related Sequences

bmy_18755T0 Protein

Length: 764 aa      View alignments
>bmy_18755T0
MSLLQVNGKELSKLSQEQTLEALRASKEPLVIQVLRRSPRLRGDGSSHDLQLVDSGTQTDITFEHIMALGKLRPPTPPMVILEPYVPSELPPISHEYYDPAEFMEGGPQEADRMDELEYEEVELYKTSHRDKLGLMVCYRTDDEEDLGIYVGEVNPNSIAAKDGRIREGDRIIQINGVDVQNREEAVAILSQEENTNISLLVARPESQLAKRWKDSDRDDFLDDCGSENEGDLRARKLKSPPAQQLQLGNEEEKGAPDAGPGLSNSQELDSGVGRTDESTRNEESSEHDLLGDEPLSTANTPGPLRKFGLQGDALQSRDFHFSMDSLLAEGAGLGGGDVPGLTDEEYERYRELLEIKCHLENGNPLGLLFPRAAGGNGALDVNRNESVGHEMAVLEEELRHLEFKCRNILRAQKMQQLRERCMKAWLLEEESLYDLGAGEPKKHELSDISELPEKSDKDSTSAYNTGESCRSTPLLAEPLPESPLRRATAGGNSNLNRTPSGHPVAAHPKAAPPQGSPAKFRSLSRDPEVGRRQRSEERVRRGPKTGVTLERVGPEGSPYLSRRHRGQGQEGERYHSCVQLAPPRGLEELGHGALSLASGPRVGGAAAAAATEAPRMEWKVKVRSDGTRYVAKRPVRDRLLKARALKIREERSGMTTDDDAVSEMKMGRYWSKEERKQHLLRAREQRRRREFMLQSRLECLREQSGDSRAELNIIALSHRKTMKKRSKKILDNWITIQEMLAHGTRSADGKRVYNPLLSVTTV*