Sequence details bmy_18781 (Coding sequence)

Part of scaffold_1882 (Scaffold)

For more information consult the page for scaffold_1882 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHST3 ENSTTRG00000009721 (Bottlenosed dolphin)

Gene Details

carbohydrate (chondroitin 6) sulfotransferase 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009203, Bottlenosed dolphin)

Protein Percentage 97.03%
cDNA percentage 97.88%
Ka/Ks Ratio 0.18346 (Ka = 0.013, Ks = 0.0707)

CHST3 ENSBTAG00000011014 (Cow)

Gene Details

carbohydrate sulfotransferase 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014629, Cow)

Protein Percentage 95.81%
cDNA percentage 93.85%
Ka/Ks Ratio 0.05844 (Ka = 0.0201, Ks = 0.3443)

Additional orthologs identified in other species via the OPTIC pipeline.

CHST3 (Human)   Chst3 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1452 bp    Location:260153..263312   Strand:+
Raw sequence 
>bmy_18781
ATGGCCCCACACTTCCCCATGGAGAAAGGACTCACTTTGCCCCAGGACTGCCGACACTTTCTGCACAGCCTGAGAATGAGGAGCAAATATGCCCTTTTCCTGGCTTTTGTGGTGGTGGTTTTTGTCTTCATTGAAAAGGAAAATAAAATCATATCAAGGGTCTCGGACAAACTGAAGCAGATCCCCCAATCCCTGGTAGATGCCAATAGCACCGACCCAGCCCTAGCCTTGGCCGAGAACGCATCCCTCCTGTCCCTGAGTGAGCTGGATTCGGCCTTCACGCAGCTGCAGAGCCGCCTGCGAAACCTCAGTCTGCAGCTGGGCGTGGCGCCGGCAGAGGAGGCTGAGGAGGAGACCGCAGAGTGGGAGCAGGGGCAGCAGCAGGAGTCCCGCCCACCCGCCGAGGCCCCGCCCCGGCGCCACTTGCTCCTCATGGCCACCACCCGCACGGGCTCCTCGTTTGTGGGCGAGTTCTTCAATCAGCAGGGCAACATCTTCTACCTCTTCGAGCCGCTGTGGCACATCGAGCGCACGGTGTCCTTCGAGCAGGGCGGCGCCAACGCCGCGGGCTCGGCCCTGGTATACCGCGACGTGCTCAAGCAGCTCTTCCTGTGCGACCTGTACCTCCTGGAGCATTTCATCATCCCGGCACCCGAGGACCACCTGACCCAGTTCGTGTTCCGCCGGGGCTCCAGCCGCTCCCTCTGCGAGGACCCCGTCTGCACGCCCCTCGTCAAGAAGGTCTTCGAGAAGTACCCTTGCAAGAACCGCCGCTGCGGCCTCCTCAACATGACGCTGGCCGCCGAGGCCTGCCGCCGCAAGGAGCACATGGCAATCAAGGCCGTCCGCATACGGCAGCTGGAGTTCCTGCAGCCGCTGGCCGAGGACCCCCGCCTGGACCTCCGCGTCATCCAGCTGGTGCGCGACCCCCGCGCTGTGCTAGCCTCCCGCATGGTGGCCTTCGCCGACAAGTACGAGACCTGGAAGAAGTGGCTGGCCAAGGGACAGGACCAGCTGAGGGAGGAGGAGGTGCAGCGGCTGAAGGGCAACTGTGAGAGCATCCGCCAGTCCGCTGAGCTGGGCCTGAGGCAGCCGGCCTGGCTGCGGGGCCGCTACATGCTGGTGCGCTACGAGGACGTGGCCCTTAGGCCGCTGCAGAAGGCCCAGGAGATGTACCGCTTTGCAGGCATTCCCCTGACCCCGCAGGTGGAGGACTGGATCCAGAAGAACACCCAGGCGGCGCACGACGGCATCTACTCCACGCAGAAGAACTCCTCGGAGCAGTTTGAGAAGTGGCGCTTCAGCATGCCCTTCAAGCTAGCGCAGGTGGTACAGGCTGCCTGCGGCCCCGCCATGCGCCTCTTCGGCTACAAGCCTGTGCAGGACGCCGCCTCACTCTCCAACCGCTCCGTCAGCCTGCTGGAGGAGCGCGGCACCTTCTGGGTCACGTAG

Related Sequences

bmy_18781T0 Protein

Length: 484 aa      View alignments
>bmy_18781T0
MAPHFPMEKGLTLPQDCRHFLHSLRMRSKYALFLAFVVVVFVFIEKENKIISRVSDKLKQIPQSLVDANSTDPALALAENASLLSLSELDSAFTQLQSRLRNLSLQLGVAPAEEAEEETAEWEQGQQQESRPPAEAPPRRHLLLMATTRTGSSFVGEFFNQQGNIFYLFEPLWHIERTVSFEQGGANAAGSALVYRDVLKQLFLCDLYLLEHFIIPAPEDHLTQFVFRRGSSRSLCEDPVCTPLVKKVFEKYPCKNRRCGLLNMTLAAEACRRKEHMAIKAVRIRQLEFLQPLAEDPRLDLRVIQLVRDPRAVLASRMVAFADKYETWKKWLAKGQDQLREEEVQRLKGNCESIRQSAELGLRQPAWLRGRYMLVRYEDVALRPLQKAQEMYRFAGIPLTPQVEDWIQKNTQAAHDGIYSTQKNSSEQFEKWRFSMPFKLAQVVQAACGPAMRLFGYKPVQDAASLSNRSVSLLEERGTFWVT*