Part of scaffold_1882 (Scaffold)

For more information consult the page for scaffold_1882 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPOCK2 ENSTTRG00000009728 (Bottlenosed dolphin)

Gene Details

sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009225, Bottlenosed dolphin)

Protein Percentage 98.04%
cDNA percentage 97.85%
Ka/Ks Ratio 0.09569 (Ka = 0.0082, Ks = 0.0857)

SPOCK2 ENSBTAG00000008827 (Cow)

Gene Details

testican-2 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000031285, Cow)

Protein Percentage 96.92%
cDNA percentage 94.3%
Ka/Ks Ratio 0.04125 (Ka = 0.0141, Ks = 0.341)

SPOCK2  (Minke Whale)

Gene Details

sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2

External Links

Gene match (Identifier: BACU019607, Minke Whale)

Protein Percentage 98.88%
cDNA percentage 98.51%
Ka/Ks Ratio 0.07353 (Ka = 0.0046, Ks = 0.0631)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1074 bp    Location:325380..316929   Strand:-
>bmy_18782
GAYGACTACATCAAGAGCTGGGAGGACAATCAGCAAGGAGATGAAGCCCTGGATACCACCAAGGACCCCTGCCAGAAGGTGAAGTGCAGCCGTCACAAAGTGTGCATTGCCCAGGGCTACCAGCGGGCAATGTGCATCAGCCGCAAGAAGCTGGAGCACAGGATCAAGCAACCTGCCCTGAAACTCCATGGAAACAAAGACACCATGTGTAAGCCCTGTCACATGGCCCACCTCGCCTCCGTCTGCGGCTCTGATGGCCACACTTACAGCTCAGTGTGTAAGCTGGAGCAGCAGGCATGCCTGAGCAGCAAGCAGCTGACGGTGAGATGCGACGGCCCCTGCCCCTGCCCCACAGAGCAGGCCGCCACCTCCTCCGCGGATGGCAAACCAGAGACCTGCACGGGCCAGGACCTGGCTGACTTGGGGGATCGGCTGCGGGACTGGTTCCAGCTCCTTCATGAGAACTCCAAGCAGAACGGCTCAGCCGGCAGTGGGGCCCGCCCGGCCAGTGGGCTAGACAAGAGCCTGGGGGCCAGCTGCAAGGACTCCATCGGCTGGATGTTCTCCAAGCTGGACACCAGTGCCGACCTCTTCCTGGACCAGACAGAGCTGGCTGCCGTCAACCTGGACAAGTACGAGGTCTGCATCCGCCCCTTCTTCAACTCCTGCGACACCTACAAGGATGGCCGTGTTTCTACCGCCGAGTGGTGCTTCTGCTTCTGGAGGGAGAAGCCCCCCTGCCTGGCAGAGTTGGAGCGTATCCAGATCCAGGAGGCTGCCAAGAAGAAGCCAGGAGTCTTCATCCCGAGCTGTGACGAGGATGGCTACTACCGGAAGATGCAGTGTGACCAGAGCAGCGGTGACTGCTGGTGTGTGGACCAGCTGGGCCTGGAGCTGACTGGCACCCGCACGCACGGGAGCCCTGACTGCGACGACATCGTGGGCTTCTCAGGGGACTTTGGGAGCGGTGTCGGCTGGGAGGACGAGGAGGAGAAGGAGACAGAGGAAGCAGGCGAGGAGGCGGAGGAAGAGGGCGAGGCGGGCGAGGCGGATGACGGAGGCTACATCTGGTAG

Related Sequences

bmy_18782T0 Protein

Length: 358 aa      View alignments
>bmy_18782T0
DDYIKSWEDNQQGDEALDTTKDPCQKVKCSRHKVCIAQGYQRAMCISRKKLEHRIKQPALKLHGNKDTMCKPCHMAHLASVCGSDGHTYSSVCKLEQQACLSSKQLTVRCDGPCPCPTEQAATSSADGKPETCTGQDLADLGDRLRDWFQLLHENSKQNGSAGSGARPASGLDKSLGASCKDSIGWMFSKLDTSADLFLDQTELAAVNLDKYEVCIRPFFNSCDTYKDGRVSTAEWCFCFWREKPPCLAELERIQIQEAAKKKPGVFIPSCDEDGYYRKMQCDQSSGDCWCVDQLGLELTGTRTHGSPDCDDIVGFSGDFGSGVGWEDEEEKETEEAGEEAEEEGEAGEADDGGYIW*