Part of scaffold_1870 (Scaffold)

For more information consult the page for scaffold_1870 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GABPA ENSTTRG00000004785 (Bottlenosed dolphin)

Gene Details

GA binding protein transcription factor, alpha subunit 60kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004506, Bottlenosed dolphin)

Protein Percentage 82.67%
cDNA percentage 84.0%
Ka/Ks Ratio 0.51991 (Ka = 0.0145, Ks = 0.0279)

GABPA ENSBTAG00000019043 (Cow)

Gene Details

GA-binding protein alpha chain

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025345, Cow)

Protein Percentage 96.22%
cDNA percentage 94.67%
Ka/Ks Ratio 0.09745 (Ka = 0.0168, Ks = 0.1723)

GABPA  (Minke Whale)

Gene Details

GA binding protein transcription factor, alpha subunit 60kDa

External Links

Gene match (Identifier: BACU000101, Minke Whale)

Protein Percentage 81.82%
cDNA percentage 85.71%
Ka/Ks Ratio 0.36943 (Ka = 0.1203, Ks = 0.3256)

Genome Location

Sequence Coding sequence

Length: 1353 bp    Location:161505..160153   Strand:-
>bmy_18795
ATGACGAAAAGAGAAGCAGAGGAGCTGATAGAAATTGAGATTGATGGAACAGAGAAACCAGAGTGCACAGAAGAAAGCATTGTTGAACAAACCTACACTCCAGCTGAATGTGTAAGCCAGGCCATAGACATCAATGAGCCAATAGGCAATTTAAAGAAACTACTAGAACCAAGACTGCAGTGTTCTTTGGATGCTCATGAAATTTGCCTGCAAGATATACAGCTGGATCCAGAACGAAGTTTATTTGACCAAGGAGTAAAGACAGATGGACCTGTACAGCTAATTTCTTACCAAGGAATTGAACCAAAGCTAAACATCCTGGAAATTGTTAAACCTGCGGAAACAGTTGAAGTAGTTATTGATCCAGATGCCCACCATGCCGAAGCAGAAGCACATCTTATTGAGGAAGCTCAAGTGATAACTCTTGATGGCACAAAACACATTACARCCATTTCAGATGAAACCTCAGAACAAGTGACGAGATGGGCTGCTGTCCTGGAAGGTTATAGGAAAGAGCAAGAACGTCTTGGGATACCCTATGATCCCATACAGTGGTCCACAGACCAAGTCCTGCATTGGATGGTTTGGGTAATGAAGGAATTCAGCATGACCGATATAGACCTCACTACGCTGAATATTTCCGGAAGAGAACTCTGTAGTCTCAACCAAGAAGATTTTTTTCAGCAGGTTCCTCGGGGAGAAATTCCCTGGAGTCATCTGGAACTTCTTCGAAAGTATGTGTTGGCAAGCCAAGAACAACAGATGAATGAGGTAGTTACAATTGATCAACCTGTGCAAATTATTCCCGCATCAGTGCAGTCTGCTACACYAACAGCYATTAAAGCTATAAATAGTAGTGCAAAGGCAGCTGAAGTACAAAGAGCTCCAAGGATTGCAGGAGAAGATAGAAGTTCACCTGGGAACAGAACAGGAAACAACGGCCAAATCCGACTGTGGCAGTTTTTGCTAGAACTTCTTACTGACAAGGATGCTCGAGACTGCATTTCTTGGGTTGGTGATGAAGGAGAATTTAAGCTAAATCAGCCCGAACTGGTTGCACAAAAATGGGGACAACGTAAAAATAAACCTACAACGAACTATGAGAAACTTAGTCGTGCATTAAGGTATTATTATGATGGGGACATGATTTGTAAAGTTCAAGGCAAGAGATTTGTATACAAGTTTGTCTGTGACTTGAAGACTCTTATTGGATACAGTGCAGCAGAGTTGAACCGTTTGGTCACAGAATGTGAACAGAAGAAACTTGCAAAGATGCAACTCCATGGAATTGCCCAGCCAGTCACAACAGTAGCCCTGGCTACTGCGTCTCTGCAAACAGAAAAGGATAATTGA

Related Sequences

bmy_18795T0 Protein

Length: 451 aa      View alignments
>bmy_18795T0
MTKREAEELIEIEIDGTEKPECTEESIVEQTYTPAECVSQAIDINEPIGNLKKLLEPRLQCSLDAHEICLQDIQLDPERSLFDQGVKTDGPVQLISYQGIEPKLNILEIVKPAETVEVVIDPDAHHAEAEAHLIEEAQVITLDGTKHITXISDETSEQVTRWAAVLEGYRKEQERLGIPYDPIQWSTDQVLHWMVWVMKEFSMTDIDLTTLNISGRELCSLNQEDFFQQVPRGEIPWSHLELLRKYVLASQEQQMNEVVTIDQPVQIIPASVQSATXTAIKAINSSAKAAEVQRAPRIAGEDRSSPGNRTGNNGQIRLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTTNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAELNRLVTECEQKKLAKMQLHGIAQPVTTVALATASLQTEKDN*