Part of scaffold_1853 (Scaffold)

For more information consult the page for scaffold_1853 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GCFC2 ENSTTRG00000014087 (Bottlenosed dolphin)

Gene Details

GC-rich sequence DNA-binding factor 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013361, Bottlenosed dolphin)

Protein Percentage 95.75%
cDNA percentage 97.27%
Ka/Ks Ratio 0.69065 (Ka = 0.0258, Ks = 0.0373)

GCFC2 ENSBTAG00000008048 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010591, Cow)

Protein Percentage 86.48%
cDNA percentage 92.45%
Ka/Ks Ratio 0.85416 (Ka = 0.0787, Ks = 0.0921)

GCFC2  (Minke Whale)

Gene Details

GC-rich sequence DNA-binding factor 2

External Links

Gene match (Identifier: BACU005535, Minke Whale)

Protein Percentage 96.6%
cDNA percentage 97.79%
Ka/Ks Ratio 0.70686 (Ka = 0.0209, Ks = 0.0296)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1914 bp    Location:79739..145807   Strand:+
>bmy_18798
GAAGAGGATGGAACACATCGTTCTTCAGAAAGTAAAGATGATCAGAGTTCATCTTCCAATAGCTCTAGCTCGCTGGAAGAAGAGTTTACATCACTAGTAAATATCCCTGATGCAGCTTTTATTCAGGCAGCCTACCGAAAACGTGAATTGGCCAGGGCCCAAGAGGACTATATTTCTTTGGATGTAAAACATGGCTTCACCATCTCTGGTATGAGGAAAAGCACTGAATATCCTGAGAGTGAGCCTGATGATCATGAAAATATAATACCATTTACCCCGAAGCTTCAAACACTTAGACAAAAGATGGCTGAAGAAACAGATGTGTGTTTTTTGAACTTTTCTCTTAAGGGACGAGACATAGATCTTTCTCATAGCAGTGAATCTCAAACAGTGAAGAAGTTCGATGCTTCCATTTCATTTCCACCAGTAAATTTAGAAATTATAAAGAAGCAACTAAATACTAGATTAACATTACTACAGGATACTCACCGCTCACACCTGAGGGAATATGAAAAATACATACAAGATGTCAAGAGCTCAAAGAGTACCATCCAGAACCTAGAGAATTCATCAAATCAAGTTCTAAATTTTAAATTCTATAAAAGCATGAAAGTTTATGTGGATAATTTAATTGACTGTCTTAATAAAAAGATTATCAACATCCAAGAAATAGAATCAGCCATGCATGCACTCCTTGTAAAACAAGCCATGATCTTTATGAAACGCAGGCAAGATGAATTAAAACATGAATCAGCATATTTACAACAGTTATCACGCAAAGCTGAGATGTCAACAAATAGAAGCTTGGCTATAGATGAAAAAACTCAGTGGAATTTAGAAGAGATTGAATCTCGAAGGGCACGAAGAAGAAAAGCAAGGGTTCTTTCTGGGAATTGTACTCATCAGGAAGGAACATCTAGTGATGATGAACTATCTTCAGACATGATTGACTTCCAAAAAAGCCAAGGTGACATTTTACAGGATCATAAGAAGATTTTTGAAGATGTACACGATGATTTTTGTAATATCCAGAATATTTTATTGAAATTTCAACAATGGCGAGAAAAGTTTCCTGATTCTTATTATGAAGCTTTCATTAGTTTATGCATTCCGAAGCTTTTACATCCCCTAATACGATTTCAGTTGATTGATTGGAATCCTCTTAAGTTTGATTCCATAGGTTTAAAACAGATGCCATGGTTCACATCTATAGAGGAATTTATAGATAGCAGTATGGAAGATTCAAAGAAGGAAGATAGTTCTGATAAGAAAATCTTGTCTACTGTCATCAGCAAAACAATTATTCCTCGACTTACAGACTTTGTAGAATTCATTTGGGATCCCTTGTCAACCTCACAGACAACAAATTTAATAACACAGAGCAGAATGATTCTTGAAGAACATTCCATTTGTGAAAATGAAGTTATTAGTAAAGGCAAACAGGATTTACTTAAACCCATTGTTTCAAGAATGAAGAAGGCAATAGATGATGATGTTTTTATTCCTCTATATCCAGAGAGTGCTGTAGAAAACAGAATGTCACCACATTCAAAGTTCCAAGAAAGACAGTTCTGGTCAGGTCTAAAGCTCTTCCGCAATATTCTTCTTTGGAATGAACTCCTCCCAGAAGACACCTTGCAAGAGCTAGGACTAGGGAAGCTGCTGAATCGTTATCTTATTATAGCTCTTCTCAATGCCATACCTGGGCCAGATGTTGTTAAAAAGTGCAACCAGCTAGAAAACTTCATCCAGTTTTTACTGCAGTCTGCACGTAAATTATCTACAAGTGAAATCAGGGATGAAGTCAAAGAAATAATTCTTATTCTGGTGAAAATAAAAGCTTTGAATCAAGCAGAATCCTTCATAGAAGAATATCACCTAGACCATCTTAAATCAGTAATTAAAGAAGTTTGA

Related Sequences

bmy_18798T0 Protein

Length: 638 aa      View alignments
>bmy_18798T0
EEDGTHRSSESKDDQSSSSNSSSSLEEEFTSLVNIPDAAFIQAAYRKRELARAQEDYISLDVKHGFTISGMRKSTEYPESEPDDHENIIPFTPKLQTLRQKMAEETDVCFLNFSLKGRDIDLSHSSESQTVKKFDASISFPPVNLEIIKKQLNTRLTLLQDTHRSHLREYEKYIQDVKSSKSTIQNLENSSNQVLNFKFYKSMKVYVDNLIDCLNKKIINIQEIESAMHALLVKQAMIFMKRRQDELKHESAYLQQLSRKAEMSTNRSLAIDEKTQWNLEEIESRRARRRKARVLSGNCTHQEGTSSDDELSSDMIDFQKSQGDILQDHKKIFEDVHDDFCNIQNILLKFQQWREKFPDSYYEAFISLCIPKLLHPLIRFQLIDWNPLKFDSIGLKQMPWFTSIEEFIDSSMEDSKKEDSSDKKILSTVISKTIIPRLTDFVEFIWDPLSTSQTTNLITQSRMILEEHSICENEVISKGKQDLLKPIVSRMKKAIDDDVFIPLYPESAVENRMSPHSKFQERQFWSGLKLFRNILLWNELLPEDTLQELGLGKLLNRYLIIALLNAIPGPDVVKKCNQLENFIQFLLQSARKLSTSEIRDEVKEIILILVKIKALNQAESFIEEYHLDHLKSVIKEV*