Part of scaffold_1857 (Scaffold)

For more information consult the page for scaffold_1857 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMEM106C ENSTTRG00000000739 (Bottlenosed dolphin)

Gene Details

transmembrane protein 106C

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000696, Bottlenosed dolphin)

Protein Percentage 97.2%
cDNA percentage 98.13%
Ka/Ks Ratio 0.41423 (Ka = 0.0118, Ks = 0.0284)

TMEM106C ENSBTAG00000000454 (Cow)

Gene Details

Transmembrane protein 106C

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000578, Cow)

Protein Percentage 89.16%
cDNA percentage 89.42%
Ka/Ks Ratio 0.20466 (Ka = 0.0595, Ks = 0.2907)

TMEM106C  (Minke Whale)

Gene Details

transmembrane protein 106C

External Links

Gene match (Identifier: BACU007962, Minke Whale)

Protein Percentage 98.4%
cDNA percentage 98.27%
Ka/Ks Ratio 0.15708 (Ka = 0.0059, Ks = 0.0376)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 753 bp    Location:5417..693   Strand:-
>bmy_18801
ATGGGGTCCCAGCAGTCCGCCTATGCTCACCCCCGTTCTTGCAAGCGGAAGAAAGCAGATGACAGGGAGGATTTGCTGGCTGAACGGGAGCAGGAAGAAGCCATTGCTCAGTTCCCATATGTGGAGTTCACAGGGCGAGATAGCATCACCTGTCTCACGTGCCAGGGGACAGGCTACATTCCAACAGAGCAAGTAAATGAGTTGGTGGCTTTGATCCCACACAGTGATCAGAGATTGCGTCCTCAGAGAACGAAGCAGTATGTCCTCCTGTCTGTTCTGCTCTGTCTCCTGGCATCTGGTTTGGTGGTTTTCTTCCTGTTTCCACATTCGGTCCTCGTGGATGATGACGGCATCAAAGTGGTGAAAGTCACGTTTAATGAGCAGGATTCCCTTGTAATCCTCGCCATCACGGCCACCCTGAAAATCAGGAACTCCAACTTCTACTCTGTGGCGGTGAGCAGCCTGTCCAGCCAGGTTCAGTACATGAACACCGTGGTTGGGTCGCATGTGACAACTAAYATCTCCCTCATTCCACCTCGGAGCGAGCATCTGGTGAATTTTACCGTGAAGGCTGAGATGGGAGGACCATTTTCCTATGTGTACTTCTTCTGCACGTTACCCGATATCCTGGTGCACAACATAGTGGTCTTCATGCGAACTTCAGTGAAGATTTCCTACRTTGGCCACATGACCCAGAGCTCCTTGGAGACACATCACTATGTGGATTGTGGAGCAAATTCCACAGCTGTTTAG

Related Sequences

bmy_18801T0 Protein

Length: 251 aa      View alignments
>bmy_18801T0
MGSQQSAYAHPRSCKRKKADDREDLLAEREQEEAIAQFPYVEFTGRDSITCLTCQGTGYIPTEQVNELVALIPHSDQRLRPQRTKQYVLLSVLLCLLASGLVVFFLFPHSVLVDDDGIKVVKVTFNEQDSLVILAITATLKIRNSNFYSVAVSSLSSQVQYMNTVVGSHVTTNISLIPPRSEHLVNFTVKAEMGGPFSYVYFFCTLPDILVHNIVVFMRTSVKISYXGHMTQSSLETHHYVDCGANSTAV*