Part of scaffold_1857 (SequenceType object (1))

For more information consult the page for scaffold_1857 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMEM106CENSTTRG00000000739 (Bottlenosed dolphin)

Gene Details

transmembrane protein 106C

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000000696, Bottlenosed dolphin)

Protein Percentage 97.2%
cDNA percentage 98.13%
Ka/Ks Ratio 0.41423 (Ka = 0.0118, Ks = 0.0284)

TMEM106CENSBTAG00000000454 (Cow)

Gene Details

Transmembrane protein 106C

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000000578, Cow)

Protein Percentage 89.16%
cDNA percentage 89.42%
Ka/Ks Ratio 0.20466 (Ka = 0.0595, Ks = 0.2907)

TMEM106C (Minke Whale)

Gene Details

transmembrane protein 106C

External Links

Gene match (Identifier: BACU007962, Minke Whale)

Protein Percentage 98.4%
cDNA percentage 98.27%
Ka/Ks Ratio 0.15708 (Ka = 0.0059, Ks = 0.0376)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 753 bp    Location:5417..693   Strand:-
>bmy_18801
ATGGGGTCCCAGCAGTCCGCCTATGCTCACCCCCGTTCTTGCAAGCGGAAGAAAGCAGATGACAGGGAGGATTTGCTGGCTGAACGGGAGCAGGAAGAAGCCATTGCTCAGTTCCCATATGTGGAGTTCACAGGGCGAGATAGCATCACCTGTCTCACGTGCCAGGGGACAGGCTACATTCCAACAGAGCAAGTAAATGAGTTGGTGGCTTTGATCCCACACAGTGATCAGAGATTGCGTCCTCAGAGAACGAAGCAGTATGTCCTCCTGTCTGTTCTGCTCTGTCTCCTGGCATCTGGTTTGGTGGTTTTCTTCCTGTTTCCACATTCGGTCCTCGTGGATGATGACGGCATCAAAGTGGTGAAAGTCACGTTTAATGAGCAGGATTCCCTTGTAATCCTCGCCATCACGGCCACCCTGAAAATCAGGAACTCCAACTTCTACTCTGTGGCGGTGAGCAGCCTGTCCAGCCAGGTTCAGTACATGAACACCGTGGTTGGGTCGCATGTGACAACTAAYATCTCCCTCATTCCACCTCGGAGCGAGCATCTGGTGAATTTTACCGTGAAGGCTGAGATGGGAGGACCATTTTCCTATGTGTACTTCTTCTGCACGTTACCCGATATCCTGGTGCACAACATAGTGGTCTTCATGCGAACTTCAGTGAAGATTTCCTACRTTGGCCACATGACCCAGAGCTCCTTGGAGACACATCACTATGTGGATTGTGGAGCAAATTCCACAGCTGTTTAG

Related Sequences

bmy_18801T0 SequenceType object (3)

Length: 251 aa      View alignments
>bmy_18801T0
MGSQQSAYAHPRSCKRKKADDREDLLAEREQEEAIAQFPYVEFTGRDSITCLTCQGTGYIPTEQVNELVALIPHSDQRLRPQRTKQYVLLSVLLCLLASGLVVFFLFPHSVLVDDDGIKVVKVTFNEQDSLVILAITATLKIRNSNFYSVAVSSLSSQVQYMNTVVGSHVTTNISLIPPRSEHLVNFTVKAEMGGPFSYVYFFCTLPDILVHNIVVFMRTSVKISYXGHMTQSSLETHHYVDCGANSTAV*