Sequence detailsbmy_18803 (Coding sequence)

Part of scaffold_1857 (SequenceType object (1))

For more information consult the page for scaffold_1857 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HDAC7ENSTTRG00000012577 (Bottlenosed dolphin)

Gene Details

histone deacetylase 7

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011934, Bottlenosed dolphin)

Protein Percentage 95.06%
cDNA percentage 95.06%
Ka/Ks Ratio 0.24897 (Ka = 0.0305, Ks = 0.1224)

HDAC7ENSBTAG00000026819 (Cow)

Gene Details

histone deacetylase 7

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000038136, Cow)

Protein Percentage 92.0%
cDNA percentage 91.57%
Ka/Ks Ratio 0.19586 (Ka = 0.0485, Ks = 0.2474)

HDAC7 (Minke Whale)

Gene Details

histone deacetylase 7

External Links

Gene match (Identifier: BACU007960, Minke Whale)

Protein Percentage 96.76%
cDNA percentage 96.84%
Ka/Ks Ratio 0.29042 (Ka = 0.0175, Ks = 0.0603)

Additional orthologs identified in other species via the OPTIC pipeline.

HDAC7 (Human)   Hdac7 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2880 bp    Location:145186..165197   Strand:+
Raw sequence 
>bmy_18803
CGGGCTGGAGTGGGGCCTCCGGGACCAGCAGGCAGCCTGCCTGGCTTGGCCCTCTCTCCTCCTCCTCCTCCCCTGCCCCTCCCGGCAGCCGATGGGACCCAGGTGAGCCCGGGTGCCCACTGCCCCAGTCCCCCTGGCACAGGCTGCCCCAGGCCCTGCGCAGACACGCCAGGCCCTCAGCCCCAGCCCATGGACCTGCGGGTGGGCCAGCGGCCCCCGGTGGAGCCCCCGCCGGAGCCCACGCTGCTGGCCCTGCAGCACCCCCAGCGCCTGCACCACCACCTCTTCCTGGCTGGCCTGCAGACCCAGCGCTCGGCGGAGACCATGAGGCTCTCAATGGACACGCCGTTGCCCGAGTTGCAGGTGGGGCAGCAGGAGCAAGAGCTGCGGCAGCTTCTCAATAAGGACAAGAGCAAGCGAAGTGCCGTAGCCAGCAGTGTGGTTAAGCAGAAGCTAGCAGAGGTGATTCTGAAGAAACAGCAGGCAGCCTTAGAGAGGACGGTCCATCCCAATAGCCCCAGCGTTCCCTACAGAACTCTTGAGCCCTTGGAGACGGAAGGAGCTGCCCGTTCCATGCTCAGCAGCTTCCTGCCTCCTGTTCCCGGCCTGCCCAGCGACCCCCCAGAACACTTCCCTCTGCGTAAGACAGTCTCTGAGCCCAACCTGAAGCTGCGCTACAAGCCCAAAAAGTCCCTGGAGCGGAGGAAGAACCCGCTGCTGCGGAAGGAGAGCGCCCCCCCCAGCCTCCGGCGGCGGCCAGCAGAAACCCTCGGCGACTCCTCCCCCAGTAGTAGCAGCACGCCGGCGTCAGGGTGCAGCTCCCCCAATGACAGCGAGCACGGCCCCAACCCGGTCCTGGGCTCCGAGGCTGATGGTGACCGCAGGACCCATGCGACTCTGGGCCCTCGGGGGCCAGTCCTGGCGAGTCCCCATGCTCCCCTCTTCCTGCCCCATGGCCTGGAGCCCGAGGCTGGAGGCCCCCTGCCCTCTCGCCTGCAGCCCATTCTCCTCCTGGACCCTTCGGTCTCTCACGCCCCCCTGCTGACTGTGCCCGGGCTTGGGCCCCTGCCCTTCCACTTTGCCCAGTCCTTACTGACCACCGAGCGGCCCTCCGGGTCAGGCCTCCACCGGCCGCTGAGCCGGACCCGCTCAGAGCCCCTGCCCCCAAGCGCCACTGCCCCCCCACTGCTGGGCCCCCTGCAGCCCCGCCTGGAGCGGCTCAAACCTCACGTCCAGCTGATCAAGAGGCCAGCCAAGCCGAGTGAGAAGCCCCGACTGCGGCAGATACCCTCGGCTGAGGACCTCGAGACAGACGGTGGGGGAGTGGGGCCGCTGGGGGATGACGGCCTGGAACACAGGGAGTCCAGCCATGGGCAGCATGAGGCCAGAGGCCCTATTCCTCTCCAGCAGCACCAGCAGGTGTACCTCTGGGAGCAGCAGCGACTGGCCGGGCGGCTCCCCCGGGGAGCCACTGGGGACTCCGTGCTGCCTCCCCTGGCCCAGGGCGGTCACCGGCCTCTGTCCAGGGCTCAGTCGTCCCCAGCCGCGCCTGCCTCACTGCCAACCCCAGAGCCCACCAGCCAGGCCCGTGTCCTGCCCAGCTCAGAGACCCCTGCCCGGACCCTGCCCTTCACCACAGGGCTGGTCTATGACTCAGTAATGCTGAAGCACCAGTGCTCCTGCGGAGACAACAGCAGGCACCCGGAGCACGCAGGCCGCATCCAGAGCATCTGGTCCCGGCTGCTGGAGCGGGGGCTCCGGAGCCAGTGTGAGTCTCTACGGGGCCGGAAGGCCTCCCTGGAGGAGCTGCAGTCAGTGCACTCGGAGCGGCACGTGCTCCTCTATGGCACCAACCCGCTCAGCCGCCTCAAACTGGACAATGGGAAGCTGGCAGGGCTCCTGGCACAGCGGATGTTCGTGATGCTGCCCTGCGGTGGCGTTGGGGTGGATACCGACACCATCTGGAACGAGCTGCACTCCTCCAATGCGGCCCGCTGGGCTGCCGGCAGCGTCACTGACCTCGCCTTCAAAGTGGCTTCCCGAGAGCTAAAGAACGGTTTTGCTGTGGTTCGGCCCCCAGGACACCATGCAGACCATTCCACAGCCATGGGCTTCTGCTTCTTCAACTCAGTGGCCATCGCCTGCCGGCAGCTGCAACAACAGGGCAAGGCCAGCAAGATCCTCATCGTGGACTGGGACGTTCACCATGGCAACGGCACACAGCAGACCTTCTACCAGGACCCCAGCGTGCTCTACATCTCCCTTCATCGCCATGACGATGGCAACTTCTTCCCAGGCAGTGGGGCTGTGGATGAGGTGGGAGCTGGCAGCGGTGAGGGCTTCAATGTCAATGTCGCCTGGGCTGGAGGTCTGGACCCCCCAATGGGGGATCCTGAGTACCTGGCCGCCTTCAGGATAGTCGTGATGCCCATCGCCCGGGAGTTCTCTCCGGACCTGGTCCTGGTGTCAGCTGGGTTTGATGCTGCCGAGGGTCACCCACCCCCACTGGGTGGCTACCATGTTTCCGCCAAATGTTTTGGGTACATGACGCAGCAGTTGATGAGCTTGGCGGGAGGTGCGGTGGTGCTGGCCTTGGAGGGTGGCCATGACCTCACAGCCATCTGTGACGCCTCTGAGGCCTGTGTGGCTGCTCTTCTAGGCAACAAGGTGGATCCCCTCTCAGAAGAAGGCTGGAAACAGAAACCCAACCTCAATGCCATCCGCTCTCTGGAAGCTGTGATCCGGGTGCACAGTGAGTGTGGAGAGAGGACACCGCTGACCCCAGACTTGGGAGAAACTTGGGGCTCTGCTGCCCCCAGTGACCAGGGCCCCAGGTCTCCCAACACCAGCCAGGCCAGGGGTGCTGCTGCTCTGGAGTAG

Related Sequences

bmy_18803T0 SequenceType object (3)

Length: 960 aa      View alignments
>bmy_18803T0
RAGVGPPGPAGSLPGLALSPPPPPLPLPAADGTQVSPGAHCPSPPGTGCPRPCADTPGPQPQPMDLRVGQRPPVEPPPEPTLLALQHPQRLHHHLFLAGLQTQRSAETMRLSMDTPLPELQVGQQEQELRQLLNKDKSKRSAVASSVVKQKLAEVILKKQQAALERTVHPNSPSVPYRTLEPLETEGAARSMLSSFLPPVPGLPSDPPEHFPLRKTVSEPNLKLRYKPKKSLERRKNPLLRKESAPPSLRRRPAETLGDSSPSSSSTPASGCSSPNDSEHGPNPVLGSEADGDRRTHATLGPRGPVLASPHAPLFLPHGLEPEAGGPLPSRLQPILLLDPSVSHAPLLTVPGLGPLPFHFAQSLLTTERPSGSGLHRPLSRTRSEPLPPSATAPPLLGPLQPRLERLKPHVQLIKRPAKPSEKPRLRQIPSAEDLETDGGGVGPLGDDGLEHRESSHGQHEARGPIPLQQHQQVYLWEQQRLAGRLPRGATGDSVLPPLAQGGHRPLSRAQSSPAAPASLPTPEPTSQARVLPSSETPARTLPFTTGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLLERGLRSQCESLRGRKASLEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQGKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPPPLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEEGWKQKPNLNAIRSLEAVIRVHSECGERTPLTPDLGETWGSAAPSDQGPRSPNTSQARGAAALE*