Part of scaffold_1857 (Scaffold)

For more information consult the page for scaffold_1857 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RAPGEF3 ENSTTRG00000012575 (Bottlenosed dolphin)

Gene Details

Rap guanine nucleotide exchange factor (GEF) 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011933, Bottlenosed dolphin)

Protein Percentage 93.14%
cDNA percentage 93.71%
Ka/Ks Ratio 0.26302 (Ka = 0.0427, Ks = 0.1624)

BT.96694 ENSBTAG00000006828 (Cow)

Gene Details

rap guanine nucleotide exchange factor 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008976, Cow)

Protein Percentage 91.08%
cDNA percentage 89.44%
Ka/Ks Ratio 0.12732 (Ka = 0.0518, Ks = 0.4065)

RAPGEF3  (Minke Whale)

Gene Details

Rap guanine nucleotide exchange factor (GEF) 3

External Links

Gene match (Identifier: BACU019969, Minke Whale)

Protein Percentage 93.59%
cDNA percentage 94.31%
Ka/Ks Ratio 0.31312 (Ka = 0.0413, Ks = 0.1317)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2625 bp    Location:187139..208673   Strand:+
>bmy_18805
ATGAAGGTGGGCTGGCCAGGTGAAAGCCGCTGGCAGGTGGGCCTGGCTGTGGAGGACAGCTCCGTCCTGGGAGCACCGCCGGTGGGAGGGCTCCCGGACGTGGTGCCGGAGGGGACGCTGCTCAACATGGTGCTGAGGAGGATGCATCGGTCCCGAAGCTGCTCCTACCAGCTGCTTCTTGAGCACCAGCGCCCCAGCTGCATCCAGGGGCTTCGCTGGACGCCACTCACCAACAGCGAGGAGTCCCTGGATTTCAGCGTGAGCCTCGAGCAGGCCTCCACGGAGCGGGTGCTTAGGGCTGGGAAGCAGCTGCATCGGCATCTCCTGGCCACCTGCCCCAACCTCATCCGAGACCGAAAGTACCACCTCAGACTCCACCGGCAATGCTGCTCTGGCAGGGAACTGGTGGATGGGATCTTGGCCCTGGGGCTGGGGGTCCATTCCCGGAGCCAAGCCGTGGGAATCTGCCAGGTGCTGCTGGATGAAGGTGCCCTCTGTCATGTGAAACACGACTGGGCCTTCCAGGATCGAGATACCCAATTCTACCGTTTCCCCGGGTCGGAGCCAGAGCCTGCAGGCATCCACGAGCTGGAGGAGGAGTTGGCTGAGGCTCTGGCCCTGCTCTCCCAGCGGGGGCCTGACGCCCTGCTCACGGTGGCGCTTCGAAAGCCCCCCGGGCAGCGCACAGACGAGGAGCTGGACCTCATCTTTGAGGAACTGCTGCACATCAAGGCCGTGGCCCACCTCTCCAACTCGGTGAAGCGGGAATTAGCGGCAGTTCTGCTCTTTGAACCACACAGCAAGGCAGGGACCGTGTTGTTCAGCCAGGGGGACAAGGGCACCTCATGGTACATCATCTGGAAGGGATCCGTCAATGTGGTGACCCACGGCAAGGGCCTGGTGACCACACTGCATGAGGGAGACGACTTTGGACAGCTGGCTCTGGTGAACGATGCACCCCGGGCAGCCACCATCATCCTGCGAGAAGACAACTGTCATTTTCTTCGCGTGGACAAGCAGGACTTCAACCGTATCATCAAGGATGTGGAAGCAAAGACCATGAGGCTGGAAGAACATGGCAAAGTGGTGTTGGTGCTGGAGAGAACCTCTCAGGGCACTGGCCCTTCTCGTCCCCCAACCCCAGGCAGGAACCGGTATATAGTGATGTCTGGCACCCCGGAGAAGATCCTAGAACTTCTGTTGGAGGCCATGCGGCCTGATTCCAGTGCTCAYGACCCAACAGAGACATTCCTCAGCGACTTCCTCCTGACCCACAGTGTCTTCATGCCCACTGCCCAGCTTTGCGCTGCCCTCCTGCACCATTTCCACGCGGAGCCCGCGGGAGGCAGCGAGCAGGAGTGCAGCACCTACATCTGCAACAAGAGACAACAGATCCTGCGGCTGGTCAGCCAGTGGGTGGCCCTGTACGGCCCCATGCTCCACACCGACACTGTGGCCACCAGCTTCCTCCAGAAACTGTCAGACCTGGTGAGCAGGGATGCCCGGCTTAGCAACCTGCTGCGGGAGCAGTGGCCAGAGAGGCGGCGACACCACAGGTTGGAAAATGGCTGTGGGAACGCATCTCCGCAGATGAAGGCCCGGAACATGCCTGTTTGGCTCCCCAGCCAGGATGAACCTCTCCCCAGCAGCAACTGTGCCATCCGAGTCGGGGACAAAGTCCCCTATGACATCTGCCGGCCGGACCACTCGGTGCTGACCCTGCAGCTGCCTGTGACGGCCTCAGTGAGAGAGGTGATGGCGGCGTTGGCCCAGGAGGACAGCTGGACTAAGGGACAGGTGCTGGTGAAGGTGAACTCTGCGGGCGACGCCGTTGGCCTGCAGCCAGATGCCCGTGGTGTGGCCACATCGCTGGGGCTCAACGAGCGGCTCTTTGTTGTCAGCCCTCAGGAAGTGCACAAGCTGACCCCACACCCCGAGCAGCTGGGGCCCACCGTGGGCTCTGCGGAGGGGCTGGACCTGGTGAGCACCAAGGACCTGGCGGGCCAGCTGACAGACCACGACTGGAGCCTCTTCAACAGCATCCACCAGGTGGAGCTGATCCACTACGTGCTGGGCCCCCAGCCCCTGCGGGACGTCACCACCGCCAACCTGGAGCGCTTCATGCGCCGCTTCAATGAGCTGCAGTACTGGGTGGCCACAGAGCTGTGTCTGTGCCCTGTGCCTGGCCTGCGGGCCCAGCTGCTCAGGAAGTTCATCAAGCTGGCTGCCCACCTTAAGGAGCAAAAGAATCTCAATTCCTTCTTTGCCATCATGTTTGGCCTCAGCAACTCGTCCATCAGCCGCCTGGCCCAGACCTGGGAGAGGCTGCCCCACAAAGTCCGGAAGCTCTACTCGGCCCTCGAGAGGCTGCTGGACCCCTCATGGAACCACCGTGTGTACCGTCTGGCCCTCACCAAGCTCTCCCCTCCCCTCATCCCCTTCATGCCCCTTCTTCTCAAAGGTAAGAGGACCAGTATCCACCTCCCTTTCTCCATCCCATCCATTCCTGCCCCTGTGTGTCCATCTGACCCTCTGAGTGATTCCAGTGTGCTGGTGCCCTGGGGGACACAAAGAGGAACTAGGAGTTCACAGGGTAGAAGCAGAGTTAAGACATGCAGACATTAG

Related Sequences

bmy_18805T0 Protein

Length: 875 aa      View alignments
>bmy_18805T0
MKVGWPGESRWQVGLAVEDSSVLGAPPVGGLPDVVPEGTLLNMVLRRMHRSRSCSYQLLLEHQRPSCIQGLRWTPLTNSEESLDFSVSLEQASTERVLRAGKQLHRHLLATCPNLIRDRKYHLRLHRQCCSGRELVDGILALGLGVHSRSQAVGICQVLLDEGALCHVKHDWAFQDRDTQFYRFPGSEPEPAGIHELEEELAEALALLSQRGPDALLTVALRKPPGQRTDEELDLIFEELLHIKAVAHLSNSVKRELAAVLLFEPHSKAGTVLFSQGDKGTSWYIIWKGSVNVVTHGKGLVTTLHEGDDFGQLALVNDAPRAATIILREDNCHFLRVDKQDFNRIIKDVEAKTMRLEEHGKVVLVLERTSQGTGPSRPPTPGRNRYIVMSGTPEKILELLLEAMRPDSSAHDPTETFLSDFLLTHSVFMPTAQLCAALLHHFHAEPAGGSEQECSTYICNKRQQILRLVSQWVALYGPMLHTDTVATSFLQKLSDLVSRDARLSNLLREQWPERRRHHRLENGCGNASPQMKARNMPVWLPSQDEPLPSSNCAIRVGDKVPYDICRPDHSVLTLQLPVTASVREVMAALAQEDSWTKGQVLVKVNSAGDAVGLQPDARGVATSLGLNERLFVVSPQEVHKLTPHPEQLGPTVGSAEGLDLVSTKDLAGQLTDHDWSLFNSIHQVELIHYVLGPQPLRDVTTANLERFMRRFNELQYWVATELCLCPVPGLRAQLLRKFIKLAAHLKEQKNLNSFFAIMFGLSNSSISRLAQTWERLPHKVRKLYSALERLLDPSWNHRVYRLALTKLSPPLIPFMPLLLKGKRTSIHLPFSIPSIPAPVCPSDPLSDSSVLVPWGTQRGTRSSQGRSRVKTCRH*