Sequence detailsbmy_18806 (Coding sequence)

Part of scaffold_1857 (SequenceType object (1))

For more information consult the page for scaffold_1857 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENDOUENSTTRG00000012573 (Bottlenosed dolphin)

Gene Details

endonuclease, polyU-specific

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011930, Bottlenosed dolphin)

Protein Percentage 73.52%
cDNA percentage 79.34%
Ka/Ks Ratio 0.50366 (Ka = 0.0741, Ks = 0.1471)

ENDOUENSBTAG00000012275 (Cow)

Gene Details

Poly(U)-specific endoribonuclease

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000043168, Cow)

Protein Percentage 88.62%
cDNA percentage 91.27%
Ka/Ks Ratio 0.19952 (Ka = 0.0547, Ks = 0.2742)

ENDOU (Minke Whale)

Gene Details

endonuclease, polyU-specific

External Links

Gene match (Identifier: BACU007958, Minke Whale)

Protein Percentage 93.92%
cDNA percentage 97.44%
Ka/Ks Ratio 1.11981 (Ka = 0.027, Ks = 0.0242)

Additional orthologs identified in other species via the OPTIC pipeline.

ENDOU (Human)   Endou (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1137 bp    Location:226145..235855   Strand:+
Raw sequence 
>bmy_18806
ATGGAGTCATGCGCATCTCGCTGTAATGAGAAATTTGACCGGGGTGCTGCTTGTCAGTGTGACCGGCGGTGTCCCCGGCACGGGGACTGCTGTGAAGACTATGAGCGCCTGTGTATAGCTGATGAGGACCCCAGAGAGCCAGAGCCATTCCTGGAGCTGGAAGAAGAGACGGAGGGGGCCCCGGCTAGCGACTTGTACTCGGCACCCAACTCCTGCCGGGGCCGCTGCCTGGAAGCCTTCGACAAGCACCACCTATGCCACTGCAACGCCCGCTGCCCAGAGTTTGGAAACTGCTGCGAGGATTTCGAGAGCCTGTGTGGCCATGAGGGCTTCTCCCACATCAGCGATGCCATAACCAAGGAGGAACTGCAGAGCATCTCTGAGAAGATCTATAGGGCAGACACCAACAAAGCCCAGAAGGCAGACATTGTTCTCAATAGCCAAAACTGCATCTCGCCCTCGGAGACCAGCGACCAAGTAGACCGCTGCCCAGAGCCGCTCTTCAGGTATGTCAGTGAGAAGCTCTTCTCCAAGCCGACCTACGCCGCCTTCATCAACCTCCTCAACAACTACCAGCGGGTCACGGGCCACGGGGAGCACTTCACAGCCCAGCAGCTGGCTGAGCAGGACACCTTCCTCAGAGACGTCATGAAGACGGCCGTCATGAAGGAACTCTACGGCTTCCTCCACCAGCAGAACCGCTACAGCACAGAACAGGAGTTCGTCAACGACTTGAAAAACATGTGGTTTGGGCTGTATTCAAGAGGCAAAGAAGAGAGGGACTCAAGTGGCTTTGAACATGTCTTCTCAGGTGAAGTCCACAAAGGCAAGGTCACTGGCTTCCATAACTGGATCCACTTCTACATGCTGGAGAAGGAGGGCCTGGTGGACTATTACAGTCACATCTGTGACGGGCGTTGGGATTCTCACCCCTATGTGCTGGCCTTGCAGTTCAGCTGGGACGGCTACTACAAGGAAGTGGGTTCAGCGTTCATCGGCAGCAGCCCCGAGTTTGAGTGCCAGTTAAGCCTGGGTGGACATCCCTTGGCCATCCAGACCTATACCTGGGACAAGTCAACCTACGGAAATGGCAAGAAGTACATCGCCACAGCCTACGTGGTGTCTTCTACCCGATAG

Related Sequences

bmy_18806T0 SequenceType object (3)

Length: 379 aa      View alignments
>bmy_18806T0
MESCASRCNEKFDRGAACQCDRRCPRHGDCCEDYERLCIADEDPREPEPFLELEEETEGAPASDLYSAPNSCRGRCLEAFDKHHLCHCNARCPEFGNCCEDFESLCGHEGFSHISDAITKEELQSISEKIYRADTNKAQKADIVLNSQNCISPSETSDQVDRCPEPLFRYVSEKLFSKPTYAAFINLLNNYQRVTGHGEHFTAQQLAEQDTFLRDVMKTAVMKELYGFLHQQNRYSTEQEFVNDLKNMWFGLYSRGKEERDSSGFEHVFSGEVHKGKVTGFHNWIHFYMLEKEGLVDYYSHICDGRWDSHPYVLALQFSWDGYYKEVGSAFIGSSPEFECQLSLGGHPLAIQTYTWDKSTYGNGKKYIATAYVVSSTR*