Part of scaffold_1896 (Scaffold)

For more information consult the page for scaffold_1896 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DDX20 ENSTTRG00000005131 (Bottlenosed dolphin)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box polypeptide 20

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004816, Bottlenosed dolphin)

Protein Percentage 73.55%
cDNA percentage 75.93%
Ka/Ks Ratio 0.52864 (Ka = 0.0674, Ks = 0.1275)

DDX20 ENSBTAG00000018717 (Cow)

Gene Details

probable ATP-dependent RNA helicase DDX20

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024914, Cow)

Protein Percentage 87.58%
cDNA percentage 90.42%
Ka/Ks Ratio 0.38021 (Ka = 0.076, Ks = 0.1999)

DDX20  (Minke Whale)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box polypeptide 20

External Links

Gene match (Identifier: BACU002705, Minke Whale)

Protein Percentage 93.66%
cDNA percentage 95.01%
Ka/Ks Ratio 0.53803 (Ka = 0.0442, Ks = 0.0822)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2226 bp    Location:189001..171902   Strand:-
>bmy_18809
ATGAGCTCTCACCCACTGGTGAGTGGAAAATTAGCTTTGGCAGGTGAGGAACTGGGTGACAGGAAGTGGGTGCTCGGCACCTCTTGTTCTCTCGCGCAGCTCACAGGAGAGAAACAAAGTCCTCTTGAAGGGGAGCCCTCTCTTGGGATTTTGATCTTGGCTCCTACAAGAGAAATTGCTGTACAGATACATTCTGTTATCACAGCCATTGGAATAAAAATGGAAGGCTTAGAGTGTCATGTGTTTATCGGAGGGACTCCATTATCACAAGACAAAACCAGACTTAAAAAGTGTCATATTGCTGTTGGTTCTCCTGGCAGAATTAAACAACTGATAGAACTTGACTACTTGAATCCAGGCAGTATACGTCTCTTTATTCTTGATGAAGCAGATAAGCTTTTAGAAGAAGGCAGCTTCCAGGAGCAAATAAATTGGATTTATTCTTCCTTGCCTGCTAGTAAACAGATGTTGGCAGTGTCAGCTACTTACCCTGAATTTTTGGCTAATGCTTTGACAAAGTACATGAGAGAGCCCACTTTTGTAAGACTAAATTCCAGTGATCCGAGTCTCATAGGTTTGAAGCAGTACTACAAAGTTGTCAGTTCATACCCTTTGGCCCATAAGATTTTTGAGGAAAAGACTCAGCATTTACAAGAATTGTTCAGCAAAATTCCATTTAATCAAGCCTTAGTCTTTTCTAATTTACACAGCAGAGCACAACACTTGGCTGATATCCTTTCTTCTAAAGGCTTTCCTGCAGAGTGCATTTCAGGCAACATGAATCAGAATCAGCGTCTTGATGCTATGGCTAAACTGAAGCAGTTTCATTGCAGAGTCCTCGTTTCCACAGATTTGACTTCCCGTGGAATTGATGCTGAGAACGTGAATCTGGTTGTAAACCTGGATGTACCATTGGATTGGGAGACATATATGCATCGGATTGGCAGAGCTGGCCGTTTTGGTACTTTGGGACTGACAGTGACCTACTGCTGTAGGGGAGAAGAAGAAAATATGGTGATGAAAATTGCCCAGAAATGTAAGATCAACCTTCTGCCTTTACCAGATCCTATTCCTCCTGGTCTGATGGAAGAATGTTTGGATTGGGATGTGGAGGTTGAAGCTGCCATGCATGCATATGGCTTAGCAAGTATACCTACACAGACCCTAAAACAAATTCAAAAAATAGAGAGCACCTTTCAAACTCAGAAAGCTCATGGTAGCCACATGGCTTCATCTAGAAATACTTCTGTATCTGCACTATCAGTCAAATCAAAAAATAATACCAAACAAAAGCTTCCTGTGAAAAGCCACTCAGAGTGTGGAATTGTAGAAAAAGCCATGTCACCAAAAGAACTGGGCTGTGCCGTACAATTGGAAGAGCAAATGAAGRATTCTATTCAGACCTCTGTTGAAAACTCTACTAACAGTCAGAACCAAGTCAAAGAAGCTTCTGTGTCACTCCCCAAAATTCCTTGTCTGTCTTCCTTTAAAACCCATCTGCCATGTACTTTGACTTTTGCAGAATTGATGGAGGATTATGAACACTATATTAAAGAGGGGTTAGAGAAACCTGTGGAAATCATCAGACACTACACAGGTCCTGGGGATCAGACTGTGAATCCTCAAAATGGTTTTGTGAGAAATAGAATTACTGAAGAGAGAGTGCAGATATTGACAAGTAGTAGCCAATCTGGAGACTCTGAGAGTGACAGTGATTCTTACAGTTCAAGGACTTCTTCCCAGAGCAAAGGAAGTAAGTCATACTTGGAAGGTTCTTCTGATACTCAGCTGAAAGACTTGGAATCTATTCCTGTGGGTGGCCATATCTCTTTGGAACAACCTCTGAATGGAAATGACACCCCTCRTCTAGTAGAGTATCAGGAATCACCTGAAATCCAAATAAAAGCAAGGCATAAAGAGGGAGCTAACCATAACCAGAGAGCTAAGCAGAGCCGGAGAAACCTTCCCAGGCGGTCTTCCTATCGATTGCAGACAGAACCCCAGGAAGATGGTTGGTATGACCACCATAGGGAAACACATCCGAGTTTTTCTAATACCTATCAGGACTATGAGGAGTACTGGAGGGCTTACTACAGGGCATGGCAGGAATACTATGCTGCTGCTTCTCAGCCGTATTATTGGAATGCTCAGAGCCATCCAAGTTGGATGGCAGCCTATCACATGAATACCATTTATGTACAAGAAATGATGCGTGGCAACCAGTGA

Related Sequences

bmy_18809T0 Protein

Length: 742 aa      View alignments
>bmy_18809T0
MSSHPLVSGKLALAGEELGDRKWVLGTSCSLAQLTGEKQSPLEGEPSLGILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMREPTFVRLNSSDPSLIGLKQYYKVVSSYPLAHKIFEEKTQHLQELFSKIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMAKLKQFHCRVLVSTDLTSRGIDAENVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMVMKIAQKCKINLLPLPDPIPPGLMEECLDWDVEVEAAMHAYGLASIPTQTLKQIQKIESTFQTQKAHGSHMASSRNTSVSALSVKSKNNTKQKLPVKSHSECGIVEKAMSPKELGCAVQLEEQMKBSIQTSVENSTNSQNQVKEASVSLPKIPCLSSFKTHLPCTLTFAELMEDYEHYIKEGLEKPVEIIRHYTGPGDQTVNPQNGFVRNRITEERVQILTSSSQSGDSESDSDSYSSRTSSQSKGSKSYLEGSSDTQLKDLESIPVGGHISLEQPLNGNDTPXLVEYQESPEIQIKARHKEGANHNQRAKQSRRNLPRRSSYRLQTEPQEDGWYDHHRETHPSFSNTYQDYEEYWRAYYRAWQEYYAAASQPYYWNAQSHPSWMAAYHMNTIYVQEMMRGNQ*