Part of scaffold_1876 (Scaffold)

For more information consult the page for scaffold_1876 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SSBP1 ENSTTRG00000009987 (Bottlenosed dolphin)

Gene Details

single-stranded DNA binding protein 1, mitochondrial

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009468, Bottlenosed dolphin)

Protein Percentage 97.2%
cDNA percentage 98.37%
Ka/Ks Ratio 0.57982 (Ka = 0.014, Ks = 0.0241)

BT.90251 ENSBTAG00000010931 (Cow)

Gene Details

single-stranded DNA-binding protein, mitochondrial precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014520, Cow)

Protein Percentage 93.71%
cDNA percentage 93.01%
Ka/Ks Ratio 0.13778 (Ka = 0.0306, Ks = 0.2224)

SSBP1  (Minke Whale)

Gene Details

single-stranded DNA binding protein 1, mitochondrial

External Links

Gene match (Identifier: BACU016734, Minke Whale)

Protein Percentage 98.6%
cDNA percentage 99.3%
Ka/Ks Ratio 0.85694 (Ka = 0.0068, Ks = 0.0079)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 432 bp    Location:225319..236338   Strand:+
>bmy_18821
ATGTTTCGAAGACCTGTAGTGCAGGTCCTTCATCAGTTTGTAAGACATGAGTCTGAAATAGCTGGCGGTTTGGTTCTCGAAAGATCTCTGAATCGTGTGCAGTTACTTGGTCGAGTAGGTCAGGACCCTGTCATGAGACAGGTAGAAGGAAAAAACCCAGTCACAATATTTTCTCTAGCAACAAATGAGATGTGGCGATCAGGGGAAAATGAAACACACCAAGTGGGTGATGTCAGTCAAAAGACAACGTGGCACAGAATTTCAGTATTCCGACCAGGCCTGAGAGATGTGGCATATCAGTCTCGAATTTATGTGGAAGGGAAAGTAGACTATGGTGAATATATGGATAAAAATAATGTGAGACGACAAGCAACAACAATTATAGCTGATAACATTATATTTCTGAGTGACCAGACGAAAGAGAAGGCATAG

Related Sequences

bmy_18821T0 Protein

Length: 144 aa      View alignments
>bmy_18821T0
MFRRPVVQVLHQFVRHESEIAGGLVLERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMWRSGENETHQVGDVSQKTTWHRISVFRPGLRDVAYQSRIYVEGKVDYGEYMDKNNVRRQATTIIADNIIFLSDQTKEKA*