Sequence details bmy_18839 (Coding sequence)

Part of scaffold_1907 (Scaffold)

For more information consult the page for scaffold_1907 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRRFIP1 ENSTTRG00000006182 (Bottlenosed dolphin)

Gene Details

leucine rich repeat (in FLII) interacting protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005848, Bottlenosed dolphin)

Protein Percentage 66.67%
cDNA percentage 69.65%
Ka/Ks Ratio 0.62251 (Ka = 0.0696, Ks = 0.1117)

LRRFIP1 ENSBTAG00000005354 (Cow)

Gene Details

leucine-rich repeat flightless-interacting protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007057, Cow)

Protein Percentage 74.24%
cDNA percentage 78.23%
Ka/Ks Ratio 0.37284 (Ka = 0.2015, Ks = 0.5403)

Additional orthologs identified in other species via the OPTIC pipeline.

LRRFIP1 (Human)   Lrrfip1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3705 bp    Location:195988..134712   Strand:-
Raw sequence 
>bmy_18839
ATGATTCTGGAGGCCTGCCAGTCTGGTGGGGAGGCCGTCTCGGGTGGCAGGGACCACCTGCTCAGAGAGGTGGTCTCTTCGAGGATCTTTGCTCCGGTCCCGAGAGGAGTTCGAGCAGAGGAGGGGGCTGGACGGACAGGCTGGGGAGGAGCGTCTCCGGGTCTGTTGCAGGCGGAGGCCAGGCTGGCGGCAAAGCGCGCGGCACGAGCAGAGGCCCGAGAGATCCGGATGAAGGAGCTGGAGCGGCAGCAGCAGGAGATCTATCAGGTTCAAAAGAAATATTATGGGCTGGATACAAAGTGGGGCGACATCGAGCAATGGATGGAAGACAGTGAGCGCTACTCCCGTAGATCCAGAAGAAGCACGTCGGCATCTGATGAAGATGAGCGCGTGTCAGTGGGTAGCCGCGGAAGTCTGAGGTCGCAGCCTGACTTGGAGTACGGGGGTCCCTACGCTTGGGACCATACATCGGCACAGCACACTGGTCCCCGGAGTCTCCCGAAACTTCGAATAGACTTGCTTTTGAATTGTAACACAAGACTTCCTGCTGAACCAAGAACTAAAGACGAATTGACTCAGGTGGAGGTTATCAGCCCACGTTGCCTGGCATCCAGGCTCCTCACAGGCTGGGATTCCCGCATCACCAGCACAAAACTGGAACCAAAAACTGCCGAGGAAAGCAAGTGCACCCAGGCCCGTGCGCCTCACTCCATGGGGACTTGGCATTTCCTCCCGTCCCCAAGTGAGTGCCCCGTAGTCACCAGTGACACTAAGAGGACAAATGGTTATGATGGAGAATTATATGGATCACAGCCCCTGAATAGAAGATCTGGCAGGAATTCCAGCTACGGCGGTGACAGCAGATTCTCTACTTTGTCATCATCCAGAGAGAACACCTTGGGACTTTCCTGCTCCGACTTCGGGCTTCTCAGTCGTGGCCTTGCTTCCAAACCCCTGTCTGCCCAGAATGGAAACCGGCCCTCCTATATGTACGGCGCTGCCCGGCCGGCTGGGAGTTACCGGGCGTCTGTGTCGGATGAGAGCAGTCTCGGTGGGGCTCGGCGGAGCAGTGCCTGCGGTTCCCACGCTCTGGGTGGGCAGCCCTCGGAGCACGGCGGCCACTTCAAGTCCAGCTCCCGCACCTCCTCGAGAGCCAGCTCGGCGCGGGCCAGCCCAGTGGTTGAAGAGAGACCAGAAAAAGACTTCGCGGAGAAGGGGTCTCGTGGCCTGCCCGGCCTGTCTGCAGCCACACTGGCCTCCCTGGGTGGGACTTCCTCTCGAAGGGACAGCGGGGACACCTCCATCTCCATTGACACTGAGGCCTCCATTAGGGAAATCAAGGAACTCAATGAGTTAAAGGACCAGATTCAGGATGTAGAAGGCAAATACATGCAGGGATTGAAAGAGATGAAGGACTCACTAGCAGAAGTTGAAGAAAAATATAAGAAGGCCATGGTTTCCAACGCTCAGCTAGACAATGAGAAGACAAACTTTATGTACCAGGTCGATATGCTAAAGGACATGATGCTGGAGCTTGAAGAGCAGCTGGCTGAGTCCAAACGGCAGTACGAGGAGAAAAGCAAAGAATTTGAAAGGGAAAAGCATGCCCACAGTATCCTCCAGTTTCAGTTTGCTGAGGTGAAAGAGGCCCTGAAGCAAAGAGAAGAAATGCTTGAGGAAATCCGACAGCTACAGCAGAAACAGGCGAGTTATATCAGGGAGATTTCTGATCTTCAGGAAACGATAGAATGGAAAGACAAAAAGATAGGGGCGTTAGAGAGGCAGAAAGAGTTCTTTGATTCCATAAGGAGTGAACGAGACGATCTTAGAGAAGAAGTAGTCGTGCTGAAAGAGGAATTAAAGAAACATGGAGTAATCCTAAATTCAGAAATAGCTACCAATGGAGAGACTTCAGACTCTCTAAATAATGTTGGCTACCAAGGTTCTACAGAGATGACAAAGGAAGAGTTAAATGCCCTCAAGGCAACAGGGGATGGGACGCTAGGCAGAGCCAATGAAGTGGAGGTGAACAATGAAATGGTGGAGAATGAGGGGAAAAGAGAAATCTTGCCGAACACTGAGCAAAGACAGCACAAAGAGGACCCAGGAGAGGACTGTGTGGACACAGAGGTGTTACATCCTGGTGACAATGCCGAGGACCAGAAAACCTCTGAAGACAGTGCCCCCTCCCCAGGAACATTAGTAAATTCTGAGAACGCGGAACAGGTTCAAAGCCAAATTCTGGAGAACACTTCCTTCTTTGAAAACACACAGCAGGTTGAGTCAAGTGAGGTCATAAACAGTGAACTAGCTGGTGAAATCCCAGGTCCTAGGATTGGGCAGGGCAGCAGTAATGCCTTGGATGTCAAAAACCAAAGTAAAGAATCTGCAGAAGAGTGGGAAAAAGAAAAACAGGAAGATTTTGAAACCAACTTGGAAGAGATTAGCATAGAACCACGTCAGGAATCTGCTCCTCTGCAAATATCTGAAGTTGGAAGGGAGAGCAGTGCAGACACTGGGGAGCAGAGTGGGAACCCCACAGAGGCTGTGCCAGAGGCAGGGCTCACTGGATCGGGGGAGCAGGTGGGCACAGTAGCCTCAAGTCCTCCAAGGGGTATCGATGACACAGTGAGTCACCATGAAAAATGGGAGGTAGATGCTCCAGAAGGCTTGGACCCAAGCTCAGGGCATGATTTAGAGAAAGAACTCACCAACCAGGAAGTAGCTGAGCCCAAGGAGGTCCCAATTCAGAGCACAGAGGTAGGTGGGGAGAACAATGAAGAGGAGGGTAAAGGAAGAAAATTAAGGGATGAGAAACCAGTCAAGCTGGAAGTCCAAGCCATTCCTTGTTCTCCAGAAGCCAAAAGCAGTCCTCAGGAGGTGACAGGTCCAAGTACGGTAGATGCTGAAAGTGAACCCCTAGGTGTGAAAGAGCCYGATGAAGAAAAGAATGACCAACAGGGAGAGGCACTGGATTCGTCGCACAAGAAAACGAAGAACAAGAAAAAGAAAAACAAGAAGAAAAAATCACCAGCACCTGTAGAAACCAAAGATGTTCAGAAAGAGTTAACATTTCAAAACCCAGATTTAAGTGAAGTGAAAGAAGAGCAGGTAAAATTTACTGACAAAAAACCAGTTGTAGAAGCACAAAATGAGGTCACTAAAAACCCAAAACAGAACACTGCGGTAGGAAGCAGTAAAAATGCCGATGGTCCAGAAAATCCTAAAATTGAGTTGGATGGAGGACTTAACCAAGACGATTTTGGTGTAAACACTAAGACAGGGAAAGCAGTAGCTGATGGAGACACGTTGGATTTTGAAGATAATACAGTTCAGTCGTCAGGCACCAGTGCCAGTAATAAAGAATTAGAGGAAGGTGCTATAAAAGATGATGCTGAAGAAGATGGCACCGCTCCCAGCCGTCCTCCAGGTCCAGACAATGAGGAAGTGCCAGGCAGCACCCTGCTCCAAGACGAAGGTCCCTCAAAGAACATTAACGATGCCTGTCAAACAGAAGGCACAGAAGAGCATGTGACATCAGAAAATCTAGGTCAGACCATCAGGAAGGTTTCAGATAGCATTAGTCTAGAAAATGATGACGTGGCACCAGCAGGCGAGGTGGGGGACTTTAATTCAGAAAGCAAGGAAGAGATGACAGGTGGACACGGGAARGGCAGAAACAAAGAGGACTGTACCTTGTCGTAG

Related Sequences

bmy_18839T0 Protein

Length: 1235 aa      View alignments
>bmy_18839T0
MILEACQSGGEAVSGGRDHLLREVVSSRIFAPVPRGVRAEEGAGRTGWGGASPGLLQAEARLAAKRAARAEAREIRMKELERQQQEIYQVQKKYYGLDTKWGDIEQWMEDSERYSRRSRRSTSASDEDERVSVGSRGSLRSQPDLEYGGPYAWDHTSAQHTGPRSLPKLRIDLLLNCNTRLPAEPRTKDELTQVEVISPRCLASRLLTGWDSRITSTKLEPKTAEESKCTQARAPHSMGTWHFLPSPSECPVVTSDTKRTNGYDGELYGSQPLNRRSGRNSSYGGDSRFSTLSSSRENTLGLSCSDFGLLSRGLASKPLSAQNGNRPSYMYGAARPAGSYRASVSDESSLGGARRSSACGSHALGGQPSEHGGHFKSSSRTSSRASSARASPVVEERPEKDFAEKGSRGLPGLSAATLASLGGTSSRRDSGDTSISIDTEASIREIKELNELKDQIQDVEGKYMQGLKEMKDSLAEVEEKYKKAMVSNAQLDNEKTNFMYQVDMLKDMMLELEEQLAESKRQYEEKSKEFEREKHAHSILQFQFAEVKEALKQREEMLEEIRQLQQKQASYIREISDLQETIEWKDKKIGALERQKEFFDSIRSERDDLREEVVVLKEELKKHGVILNSEIATNGETSDSLNNVGYQGSTEMTKEELNALKATGDGTLGRANEVEVNNEMVENEGKREILPNTEQRQHKEDPGEDCVDTEVLHPGDNAEDQKTSEDSAPSPGTLVNSENAEQVQSQILENTSFFENTQQVESSEVINSELAGEIPGPRIGQGSSNALDVKNQSKESAEEWEKEKQEDFETNLEEISIEPRQESAPLQISEVGRESSADTGEQSGNPTEAVPEAGLTGSGEQVGTVASSPPRGIDDTVSHHEKWEVDAPEGLDPSSGHDLEKELTNQEVAEPKEVPIQSTEVGGENNEEEGKGRKLRDEKPVKLEVQAIPCSPEAKSSPQEVTGPSTVDAESEPLGVKEPDEEKNDQQGEALDSSHKKTKNKKKKNKKKKSPAPVETKDVQKELTFQNPDLSEVKEEQVKFTDKKPVVEAQNEVTKNPKQNTAVGSSKNADGPENPKIELDGGLNQDDFGVNTKTGKAVADGDTLDFEDNTVQSSGTSASNKELEEGAIKDDAEEDGTAPSRPPGPDNEEVPGSTLLQDEGPSKNINDACQTEGTEEHVTSENLGQTIRKVSDSISLENDDVAPAGEVGDFNSESKEEMTGGHGKGRNKEDCTLS*