Sequence detailsbmy_18839 (Coding sequence)

Part of scaffold_1907 (SequenceType object (1))

For more information consult the page for scaffold_1907 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRRFIP1ENSTTRG00000006182 (Bottlenosed dolphin)

Gene Details

leucine rich repeat (in FLII) interacting protein 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005848, Bottlenosed dolphin)

Protein Percentage 66.67%
cDNA percentage 69.65%
Ka/Ks Ratio 0.62251 (Ka = 0.0696, Ks = 0.1117)

LRRFIP1ENSBTAG00000005354 (Cow)

Gene Details

leucine-rich repeat flightless-interacting protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000007057, Cow)

Protein Percentage 74.24%
cDNA percentage 78.23%
Ka/Ks Ratio 0.37284 (Ka = 0.2015, Ks = 0.5403)

Additional orthologs identified in other species via the OPTIC pipeline.

LRRFIP1 (Human)   Lrrfip1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3705 bp    Location:195988..134712   Strand:-
Raw sequence 
>bmy_18839
ATGATTCTGGAGGCCTGCCAGTCTGGTGGGGAGGCCGTCTCGGGTGGCAGGGACCACCTGCTCAGAGAGGTGGTCTCTTCGAGGATCTTTGCTCCGGTCCCGAGAGGAGTTCGAGCAGAGGAGGGGGCTGGACGGACAGGCTGGGGAGGAGCGTCTCCGGGTCTGTTGCAGGCGGAGGCCAGGCTGGCGGCAAAGCGCGCGGCACGAGCAGAGGCCCGAGAGATCCGGATGAAGGAGCTGGAGCGGCAGCAGCAGGAGATCTATCAGGTTCAAAAGAAATATTATGGGCTGGATACAAAGTGGGGCGACATCGAGCAATGGATGGAAGACAGTGAGCGCTACTCCCGTAGATCCAGAAGAAGCACGTCGGCATCTGATGAAGATGAGCGCGTGTCAGTGGGTAGCCGCGGAAGTCTGAGGTCGCAGCCTGACTTGGAGTACGGGGGTCCCTACGCTTGGGACCATACATCGGCACAGCACACTGGTCCCCGGAGTCTCCCGAAACTTCGAATAGACTTGCTTTTGAATTGTAACACAAGACTTCCTGCTGAACCAAGAACTAAAGACGAATTGACTCAGGTGGAGGTTATCAGCCCACGTTGCCTGGCATCCAGGCTCCTCACAGGCTGGGATTCCCGCATCACCAGCACAAAACTGGAACCAAAAACTGCCGAGGAAAGCAAGTGCACCCAGGCCCGTGCGCCTCACTCCATGGGGACTTGGCATTTCCTCCCGTCCCCAAGTGAGTGCCCCGTAGTCACCAGTGACACTAAGAGGACAAATGGTTATGATGGAGAATTATATGGATCACAGCCCCTGAATAGAAGATCTGGCAGGAATTCCAGCTACGGCGGTGACAGCAGATTCTCTACTTTGTCATCATCCAGAGAGAACACCTTGGGACTTTCCTGCTCCGACTTCGGGCTTCTCAGTCGTGGCCTTGCTTCCAAACCCCTGTCTGCCCAGAATGGAAACCGGCCCTCCTATATGTACGGCGCTGCCCGGCCGGCTGGGAGTTACCGGGCGTCTGTGTCGGATGAGAGCAGTCTCGGTGGGGCTCGGCGGAGCAGTGCCTGCGGTTCCCACGCTCTGGGTGGGCAGCCCTCGGAGCACGGCGGCCACTTCAAGTCCAGCTCCCGCACCTCCTCGAGAGCCAGCTCGGCGCGGGCCAGCCCAGTGGTTGAAGAGAGACCAGAAAAAGACTTCGCGGAGAAGGGGTCTCGTGGCCTGCCCGGCCTGTCTGCAGCCACACTGGCCTCCCTGGGTGGGACTTCCTCTCGAAGGGACAGCGGGGACACCTCCATCTCCATTGACACTGAGGCCTCCATTAGGGAAATCAAGGAACTCAATGAGTTAAAGGACCAGATTCAGGATGTAGAAGGCAAATACATGCAGGGATTGAAAGAGATGAAGGACTCACTAGCAGAAGTTGAAGAAAAATATAAGAAGGCCATGGTTTCCAACGCTCAGCTAGACAATGAGAAGACAAACTTTATGTACCAGGTCGATATGCTAAAGGACATGATGCTGGAGCTTGAAGAGCAGCTGGCTGAGTCCAAACGGCAGTACGAGGAGAAAAGCAAAGAATTTGAAAGGGAAAAGCATGCCCACAGTATCCTCCAGTTTCAGTTTGCTGAGGTGAAAGAGGCCCTGAAGCAAAGAGAAGAAATGCTTGAGGAAATCCGACAGCTACAGCAGAAACAGGCGAGTTATATCAGGGAGATTTCTGATCTTCAGGAAACGATAGAATGGAAAGACAAAAAGATAGGGGCGTTAGAGAGGCAGAAAGAGTTCTTTGATTCCATAAGGAGTGAACGAGACGATCTTAGAGAAGAAGTAGTCGTGCTGAAAGAGGAATTAAAGAAACATGGAGTAATCCTAAATTCAGAAATAGCTACCAATGGAGAGACTTCAGACTCTCTAAATAATGTTGGCTACCAAGGTTCTACAGAGATGACAAAGGAAGAGTTAAATGCCCTCAAGGCAACAGGGGATGGGACGCTAGGCAGAGCCAATGAAGTGGAGGTGAACAATGAAATGGTGGAGAATGAGGGGAAAAGAGAAATCTTGCCGAACACTGAGCAAAGACAGCACAAAGAGGACCCAGGAGAGGACTGTGTGGACACAGAGGTGTTACATCCTGGTGACAATGCCGAGGACCAGAAAACCTCTGAAGACAGTGCCCCCTCCCCAGGAACATTAGTAAATTCTGAGAACGCGGAACAGGTTCAAAGCCAAATTCTGGAGAACACTTCCTTCTTTGAAAACACACAGCAGGTTGAGTCAAGTGAGGTCATAAACAGTGAACTAGCTGGTGAAATCCCAGGTCCTAGGATTGGGCAGGGCAGCAGTAATGCCTTGGATGTCAAAAACCAAAGTAAAGAATCTGCAGAAGAGTGGGAAAAAGAAAAACAGGAAGATTTTGAAACCAACTTGGAAGAGATTAGCATAGAACCACGTCAGGAATCTGCTCCTCTGCAAATATCTGAAGTTGGAAGGGAGAGCAGTGCAGACACTGGGGAGCAGAGTGGGAACCCCACAGAGGCTGTGCCAGAGGCAGGGCTCACTGGATCGGGGGAGCAGGTGGGCACAGTAGCCTCAAGTCCTCCAAGGGGTATCGATGACACAGTGAGTCACCATGAAAAATGGGAGGTAGATGCTCCAGAAGGCTTGGACCCAAGCTCAGGGCATGATTTAGAGAAAGAACTCACCAACCAGGAAGTAGCTGAGCCCAAGGAGGTCCCAATTCAGAGCACAGAGGTAGGTGGGGAGAACAATGAAGAGGAGGGTAAAGGAAGAAAATTAAGGGATGAGAAACCAGTCAAGCTGGAAGTCCAAGCCATTCCTTGTTCTCCAGAAGCCAAAAGCAGTCCTCAGGAGGTGACAGGTCCAAGTACGGTAGATGCTGAAAGTGAACCCCTAGGTGTGAAAGAGCCYGATGAAGAAAAGAATGACCAACAGGGAGAGGCACTGGATTCGTCGCACAAGAAAACGAAGAACAAGAAAAAGAAAAACAAGAAGAAAAAATCACCAGCACCTGTAGAAACCAAAGATGTTCAGAAAGAGTTAACATTTCAAAACCCAGATTTAAGTGAAGTGAAAGAAGAGCAGGTAAAATTTACTGACAAAAAACCAGTTGTAGAAGCACAAAATGAGGTCACTAAAAACCCAAAACAGAACACTGCGGTAGGAAGCAGTAAAAATGCCGATGGTCCAGAAAATCCTAAAATTGAGTTGGATGGAGGACTTAACCAAGACGATTTTGGTGTAAACACTAAGACAGGGAAAGCAGTAGCTGATGGAGACACGTTGGATTTTGAAGATAATACAGTTCAGTCGTCAGGCACCAGTGCCAGTAATAAAGAATTAGAGGAAGGTGCTATAAAAGATGATGCTGAAGAAGATGGCACCGCTCCCAGCCGTCCTCCAGGTCCAGACAATGAGGAAGTGCCAGGCAGCACCCTGCTCCAAGACGAAGGTCCCTCAAAGAACATTAACGATGCCTGTCAAACAGAAGGCACAGAAGAGCATGTGACATCAGAAAATCTAGGTCAGACCATCAGGAAGGTTTCAGATAGCATTAGTCTAGAAAATGATGACGTGGCACCAGCAGGCGAGGTGGGGGACTTTAATTCAGAAAGCAAGGAAGAGATGACAGGTGGACACGGGAARGGCAGAAACAAAGAGGACTGTACCTTGTCGTAG

Related Sequences

bmy_18839T0 SequenceType object (3)

Length: 1235 aa      View alignments
>bmy_18839T0
MILEACQSGGEAVSGGRDHLLREVVSSRIFAPVPRGVRAEEGAGRTGWGGASPGLLQAEARLAAKRAARAEAREIRMKELERQQQEIYQVQKKYYGLDTKWGDIEQWMEDSERYSRRSRRSTSASDEDERVSVGSRGSLRSQPDLEYGGPYAWDHTSAQHTGPRSLPKLRIDLLLNCNTRLPAEPRTKDELTQVEVISPRCLASRLLTGWDSRITSTKLEPKTAEESKCTQARAPHSMGTWHFLPSPSECPVVTSDTKRTNGYDGELYGSQPLNRRSGRNSSYGGDSRFSTLSSSRENTLGLSCSDFGLLSRGLASKPLSAQNGNRPSYMYGAARPAGSYRASVSDESSLGGARRSSACGSHALGGQPSEHGGHFKSSSRTSSRASSARASPVVEERPEKDFAEKGSRGLPGLSAATLASLGGTSSRRDSGDTSISIDTEASIREIKELNELKDQIQDVEGKYMQGLKEMKDSLAEVEEKYKKAMVSNAQLDNEKTNFMYQVDMLKDMMLELEEQLAESKRQYEEKSKEFEREKHAHSILQFQFAEVKEALKQREEMLEEIRQLQQKQASYIREISDLQETIEWKDKKIGALERQKEFFDSIRSERDDLREEVVVLKEELKKHGVILNSEIATNGETSDSLNNVGYQGSTEMTKEELNALKATGDGTLGRANEVEVNNEMVENEGKREILPNTEQRQHKEDPGEDCVDTEVLHPGDNAEDQKTSEDSAPSPGTLVNSENAEQVQSQILENTSFFENTQQVESSEVINSELAGEIPGPRIGQGSSNALDVKNQSKESAEEWEKEKQEDFETNLEEISIEPRQESAPLQISEVGRESSADTGEQSGNPTEAVPEAGLTGSGEQVGTVASSPPRGIDDTVSHHEKWEVDAPEGLDPSSGHDLEKELTNQEVAEPKEVPIQSTEVGGENNEEEGKGRKLRDEKPVKLEVQAIPCSPEAKSSPQEVTGPSTVDAESEPLGVKEPDEEKNDQQGEALDSSHKKTKNKKKKNKKKKSPAPVETKDVQKELTFQNPDLSEVKEEQVKFTDKKPVVEAQNEVTKNPKQNTAVGSSKNADGPENPKIELDGGLNQDDFGVNTKTGKAVADGDTLDFEDNTVQSSGTSASNKELEEGAIKDDAEEDGTAPSRPPGPDNEEVPGSTLLQDEGPSKNINDACQTEGTEEHVTSENLGQTIRKVSDSISLENDDVAPAGEVGDFNSESKEEMTGGHGKGRNKEDCTLS*