Part of scaffold_1872 (Scaffold)

For more information consult the page for scaffold_1872 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CTTNBP2NL ENSTTRG00000009949 (Bottlenosed dolphin)

Gene Details

CTTNBP2 N-terminal like

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009431, Bottlenosed dolphin)

Protein Percentage 46.49%
cDNA percentage 46.43%
Ka/Ks Ratio 0.09053 (Ka = 0.0063, Ks = 0.0696)

CTTNBP2NL ENSBTAG00000021602 (Cow)

Gene Details

CTTNBP2 N-terminal-like protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028787, Cow)

Protein Percentage 92.81%
cDNA percentage 91.81%
Ka/Ks Ratio 0.16527 (Ka = 0.0371, Ks = 0.2247)

CTTNBP2NL  (Minke Whale)

Gene Details

CTTNBP2 N-terminal like

External Links

Gene match (Identifier: BACU002702, Minke Whale)

Protein Percentage 99.82%
cDNA percentage 99.12%
Ka/Ks Ratio 0.03394 (Ka = 0.0008, Ks = 0.0247)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1731 bp    Location:402833..393697   Strand:-
>bmy_18852
ATGGCACTCCAGAGAGACTTTGAAACACTGAAGGAGAAGAACGATGGCGAGAAGCAGCCAGTCTGCACAAACCCGCTGTCGATCCTTAAGGTGGTGATGAAGCAGTGCAAGAACATGCAGGAGCGCATGCTGTCGCAGCTGGCTGCCGCCGAGAGCAGGCACCGCAAGGTAATCCTRGACCTTGAGGAAGAAAGGCAAAGGCATGCACAGGACACAGCTGAAGGAGATGATTTGGAATTTGAAAAGTCCCAAGTGAAAAAGTTTGAAAAAGAGCAGAAGAAGCTCTCCAGTCAGCTGGAAGAGGAGCGCTCCCGCCACAAGCAGCTCTCCTCCATGCTGGTGCGCGAGTGCAAGAAGGCCACCAACAAGGCCGCCGAGGAGGGCCAGAAGGCGGGAGAGCTGAGCCTGAAACTAGAGAAGGAGAAGAGTCGGGTGAGCAAGCTGGAGGAAGAGCTGGCTGCTGAGAGGAAGCGGGGCTTGCAGACGGAGGCCCAGGTGGAGAAGCAGTTGTCTGAGTTTGACATTGAAAGGGAACAACTGAGAGCGAAGCTGAACCGAGAAGAGAACCGGACCAGAACTCTGAAAGAAGAGATGGAGAGTTTGAAGAAGATAGTGAAGGACCTAGAGGCTTTGCACCAGCAAAGTAGCCCCGGCGAGCAAGGGAAGAAACCAGTAACCCTGTCTAAAGGCACGGCAACTGAGCCGCCCGTGCTAGTGTCCGTATTTTGCCAAACGGAGAGTTTTCAGGCAGAAAGAACCCATGGGAGCAGCACGGCCAAGGTAACAGCCACAGGGCTGCCAACAGCCACAGGGCTGCCTGGTCCCACCACTCCTGCTTACTCTTATGCAAAAACCAATGGACATTTTGACCCAGAAATGCAAACTACCAAGGAGCTGATTACAGGCAGCAGTGTAGAAAACCAAGCGCCTCCACGAGAGAAGCCTGTGGGATTGGCCCAAGAGAAAGCAGTAGAGAATGGTGGGTGTCCTGTGGGAATAGAGACTCCAGTCCCAGCGCCTGGTCACCTCCCTTCCAGTGGGAGCTCACTGTCCCCCAGCAGCACTGCCTCTTCCTCTCTCACATCCTCTCCTTGCTCTTCACCAGTACTAACCAAGCGCTTATTGGGGTCATCAGCTAGCAGCCCTGGCTACCAGTCATCCTACCAAGTAGGGATCAACCAGCGGTTCCATGCAGCTCGGCACAAATTTCAGTCCCAAGCAGATCAGGACCAACAAGCTAGTGGTCTACAGAGCCCTCCATCCAGGGATCTATCCCCAACCCTCATAGACAACTCTGCCGCCAAGCAGCTGGCCCGAAACACAGTCACCCAGGTGCTCTCCAGATTCACTAGCCAACAAGGACCAATCAAGCCCGTGTCTCCCAACAGCTCTCCCTTTGGCACAGACTATCGAAATCTGGCCAACACGGCCAGCCCAAGAGGTGACAGCAGCCATTCACCTACTCCAGGGAAAGTGTCTAGTCCTCTGAGCCCCCTGTCTCCAGGSATCAAGTCCCCTACCATCCCCAGAGCTGAGAGAGGAAACCCTCCACCCATCCCACCCAAGAAACCTGGCCTCGCTCCTTCTCCATCTGCTGCCACTCCACCGAGCAAACCTCATCCCCAGGCATCCTCTTTGACCACCACAGAAGACCTTGCCAGCAGCTGCTCTTCTAATGCTGTCGTAGCCAATGGCAAGGACGTTGAGATACTTTTGCCTACCAGTAGCTAG

Related Sequences

bmy_18852T0 Protein

Length: 577 aa      View alignments
>bmy_18852T0
MALQRDFETLKEKNDGEKQPVCTNPLSILKVVMKQCKNMQERMLSQLAAAESRHRKVILDLEEERQRHAQDTAEGDDLEFEKSQVKKFEKEQKKLSSQLEEERSRHKQLSSMLVRECKKATNKAAEEGQKAGELSLKLEKEKSRVSKLEEELAAERKRGLQTEAQVEKQLSEFDIEREQLRAKLNREENRTRTLKEEMESLKKIVKDLEALHQQSSPGEQGKKPVTLSKGTATEPPVLVSVFCQTESFQAERTHGSSTAKVTATGLPTATGLPGPTTPAYSYAKTNGHFDPEMQTTKELITGSSVENQAPPREKPVGLAQEKAVENGGCPVGIETPVPAPGHLPSSGSSLSPSSTASSSLTSSPCSSPVLTKRLLGSSASSPGYQSSYQVGINQRFHAARHKFQSQADQDQQASGLQSPPSRDLSPTLIDNSAAKQLARNTVTQVLSRFTSQQGPIKPVSPNSSPFGTDYRNLANTASPRGDSSHSPTPGKVSSPLSPLSPGIKSPTIPRAERGNPPPIPPKKPGLAPSPSAATPPSKPHPQASSLTTTEDLASSCSSNAVVANGKDVEILLPTSS*