Part of scaffold_1874 (Scaffold)

For more information consult the page for scaffold_1874 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CTNNB1 ENSTTRG00000006093 (Bottlenosed dolphin)

Gene Details

catenin (cadherin-associated protein), beta 1, 88kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005764, Bottlenosed dolphin)

Protein Percentage 99.36%
cDNA percentage 99.02%
Ka/Ks Ratio 0.17961 (Ka = 0.0044, Ks = 0.0246)

CTNNB1 ENSBTAG00000016420 (Cow)

Gene Details

Catenin beta-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021838, Cow)

Protein Percentage 99.49%
cDNA percentage 95.69%
Ka/Ks Ratio 0.02478 (Ka = 0.0038, Ks = 0.1535)

CTNNB1  (Minke Whale)

Gene Details

catenin (cadherin-associated protein), beta 1, 88kDa

External Links

Gene match (Identifier: BACU015654, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 98.96%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0348)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2397 bp    Location:168582..213257   Strand:+
>bmy_18854
ATGATTTTTTTCGATGAATTTAGGATTTTGTCGCAGTATACATCTGCAGTCCCAGAATCCTCCGCTGACTTGATGGAGCTGGACATGGCCATGGAGCCAGACAGAAAAGCAGCTGTTAGTCACTGGCAGCAACAATCTTACCTGGACTCTGGAATCCATTCTGGTGCCACTACCACAGCTCCTTCTCTGAGTGGTAAAGGCAATCCTGAGGAAGAGGATGTGGATACCACCCAAGTCCTGTATGAGTGGGAGCAGGGATTTTCTCAGTCCTTCACTCAAGAACAAGTAGCTGATATCGATGGACAGTATGCAATGACTCGCGCTCAGAGGGTACGAGCTGCTATGTTCCCTGAGACATTAGACGAGGGCATGCAGATCCCATCTACACAGTTTGATGCCGCTCATCCCACTAATGTCCAGCGTCTGGCTGAACCATCACAGATGCTGAAACATGCAGTTGTAAATTTGATTAACTATCAAGATGATGCAGAACTTGCCACACGTGCAATCCCTGAATTGACAAAACTGCTAAATGATGAAGACCAGGTGGTGGTTAATAAGGCTGCAGTTATGGTCCATCAGCTTTCTAAAAAGGAAGCTTCCAGACACGCCATCATGCGTTCTCCTCAGATGGTGTCTGCTATTGTACGCACCATGCAGAATACAAATGATGTGGAAACGGCTCGCTGTACTGCTGGGACCTTGCACAATCTTTCCCATCATCGTGAGGGCTTGCTGGCCATCTTTAAGTCTGGGGGCATTCCTGCCCTGGTGAAGATGCTTGGTTCACCAGTGGATTCTGTATTGTTTTATGCCATTACAACTCTCCACAACCTTTTATTGCATCAGGAAGGAGCTAAAATGGCAGTGCGTTTAGCTGGCGGGCTGCAGAAAATGGTTGCCTTGCTCAACAAAACAAATGTTAAATTCTTGGCTATTACAACAGACTGCCTTCAGATTTTAGCTTATGGCAATCAAGAAAGCAAGCTGATCATTTTGGCTAGTGGTGGACCTCAAGCTTTAGTGAATATAATGAGGACCTACACCTATGAGAAACTACTGTGGACCACAAGCAGAGTACTGAAGGTGCTGTCTGTCTGCTCTAGTAATAAGCCGGCTATTGTAGAAGCTGGTGGAATGCAAGCTTTAGGACTTCACCTGACAGATCCAAGTCAGCGTCTTGTTCAGAACTGTCTTTGGACTCTGAGGAATCTTTCAGATGCTGCAACTAAACAGGAAGGGATGGAAGGTCTTCTTGGGACCCTTGTTCAGCTTCTGGGCTCAGATGATATAAATGTGGTCACCTGTGCAGCTGGAATTCTTTCTAATCTCACTTGCAATAATTACAAGAACAAGATGATGGTGTGCCAAGTGGGTGGTATAGAGGCTCTTGTGCGTACTGTCCTTCGTGCTGGTGACAGGGAGGATATCACTGAGCCTGCCATCTGTGCTCTTCGTCATCTGACCAGCCGACACCAGGAAGCTGAGATGGCCCAGAATGCTGTTCGCCTTCACTATGGACTGCCAGTTGTGGTTAAACTCCTACATCCACCATCCCATTGGCCTCTGATCAAGGCTACCGTTGGATTGATTCGAAATCTTGCCCTTTGTCCCGCAAATCACGCACCTTTGCGTGAGCAGGGTGCCATTCCACGACTAGTTCAGTTGCTGGTTCGTGCACATCAGGATACCCAGCGCCGTACATCTATGGGTGGAACACAGCAGCAGTTTGTGGAGGGGGTCCGCATGGAAGAAATAGTTGAAGGTTGTACTGGAGCCCTTCACATCCTAGCTCGGGATGTTCACAACCGAATTGTTATCAGAGGYCTAAATACCATTCCATTGTTTGTGCAGCTGCTTTATTCTCCCATTGAAAATATCCAAAGAGTAGCTGCAGGGGTCCTCTGTGAACTCGCTCAGGACAAGGAGGCTGCAGAAGCTATTGAAGCTGAGGGAGCCACAGCTCCTCTGACAGAATTACTTCATTCTAGGAATGAAGGTGTGGCAACATATGCAGCTGCTGTTTTGTTCCGAATGTCTGAGGACAAGCCACAGGATTATAAGAAGCGGCTTTCGGTTGAGCTGACCAGTTCTCTCTTCAGAACGGAGCCAATGGCTTGGAATGAGACTGCTGATCTTGGACTTGATATCGGTGCCCAGGGAGAACCCCTCGGATATCGCCAGGATGATCCCAGCTATCGTTCTTTTCACTCTGGTGGATACGGCCAGGATGCCTTGGGTATGGACCCCATGATGGAGCATGAGATGGGCGGCCACCACCCTGGTGCTGACTATCCAGTTGATGGGCTGCCAGATCTGGGGCATGCCCAGGACCTCATGGATGGGCTGCCTCCAGGTGACAGCAATCAGCTGGCCTGGTTTGATACTGACCTGTAA

Related Sequences

bmy_18854T0 Protein

Length: 799 aa      View alignments
>bmy_18854T0
MIFFDEFRILSQYTSAVPESSADLMELDMAMEPDRKAAVSHWQQQSYLDSGIHSGATTTAPSLSGKGNPEEEDVDTTQVLYEWEQGFSQSFTQEQVADIDGQYAMTRAQRVRAAMFPETLDEGMQIPSTQFDAAHPTNVQRLAEPSQMLKHAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSEDKPQDYKKRLSVELTSSLFRTEPMAWNETADLGLDIGAQGEPLGYRQDDPSYRSFHSGGYGQDALGMDPMMEHEMGGHHPGADYPVDGLPDLGHAQDLMDGLPPGDSNQLAWFDTDL*