Sequence detailsbmy_18855 (Coding sequence)

Part of scaffold_1894 (SequenceType object (1))

For more information consult the page for scaffold_1894 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNX18ENSBTAG00000027924 (Cow)

Gene Details

sorting nexin-18

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000040053, Cow)

Protein Percentage 98.4%
cDNA percentage 95.89%
Ka/Ks Ratio 0.02614 (Ka = 0.0071, Ks = 0.2702)

Additional orthologs identified in other species via the OPTIC pipeline.

SNX18 (Human)   Snx18 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1878 bp    Location:246382..222003   Strand:-
Raw sequence 
>bmy_18855
ATGGCGCTGCGCGCCCGGGCGCTGTACGACTTCAGGTCGGAGAACCCGGGCGAGATCTCGCTGCGGGAGCACGAGGTGCTGAGCCTGTGCAGCGAGCAGGACATCGAGGGCTGGCTCGAGGGGATCAACAGCCGCGGGGACCGCGGCCTCTTCCCGGCCTCGTACGTGCAGGTGATCCGAGCCCCCGAGCCCGGCCCGGCGGGCGACGGCGGCCCGGGCGCCCCGGCCCGCTACGCCAACGTGCCACCCGGCGGTTTCGAGCCCCTGCCCGCCGCGCCGCCCGCCTCCTTCAAGCCGCCGCCCGACGCCTTCCAGCCGCTGCTGCAACCGCAGCAGGCGCCGCCGCCGAGCACCTTCCAGCCGCCGGGCGCTGGCTTCTCGTATGGCGGGGGTGCCCTGCAGCCGTCGCCGCAGCAGCTCTACGGCGGCGGCTACCAGGCCAGCCAGGGCAGCGACGATGACTGGGACGACGAGTGGGACGACAGCTCCACGGTGGCTGACGAGCCGGGCGTGCTGGGCAGCGGCGCGTACCCGGACCTCGACGGCTCGTCGTCGGGGGGCGTCGGCGTTGCAGGCCGCTACCGCCTGTCCACGCGCTCCGACTTGTCGCTGGGCTCCCGCGGCGGCTCGGCGCCCCCGCAGCACCACCCGTCGGGGGCCAAGAGCTCGGCCACCGTGAGCCGCAACCTCAACCGCTTCTCCACCTTCGTCAAGTCGGGCGGGGAGGCCTTCGTGCTGGGCGAGGCGTCGGGTTTCGTGAAGGACGGGGACAAGCTGTGCGTGGTGCTGGGGCCCTACGGCCCCGAGTGGCAGGAGAACCCCTACCCCTTCCAGTGCACCATCGACGACCCCACTAAGCAGACCAAGTTCAAGGGCATGAAGAGCTACATCTCCTACAAGCTGGTGCCCACGCACACGCAGGTGCCAGTGCACCGGCGCTACAAGCACTTCGACTGGCTGTATGCGCGCCTGGCCGAGAAGTTCCCCGTCATCTCGGTGCCCCACCTGCCCGAGAAGCAGGCCACCGGCCGCTTCGAGGAGGACTTCATCTCCAAGCGCAGGAAGGGCCTGATCTGGTGGATGAACCACATGGCCAGCCACCCGGTGCTGGCGCAGTGCGACGTCTTCCAGCACTTCCTAACCTGCCCCAGCAGCACTGACGAGAAGGCCTGGAAACARGGCAAGAGGAAGGCCGAGAARGATGAGATGGTGGGCGCCAACTTCTTCCTGACCCTGAGCACACCCCCCGCCGCCGCCCTCGACCTGCAGGAGGTGGAGAGCAAGATCGACGGCTTCAAGTGCTTCACCAAGAAGATGGACGACAGCGCGCTGCAGCTCAACCACACGGCCAATGAATTCGCGCGCAAGCAGGTGACGGGCTTCAAGAAGGAGTATCAGAAGGTGGGCCAGTCCTTCCGCGGCCTCAGCCAGGCCTTTGAGCTGGACCAGCAGGCCTTCTCGGCCGGCCTGAACCAGGCCATCGCCTTCACCGGAGATGCCTACGACGCCATCGGCGAGCTCTTCGCCGAGCAGCCCAGGCAGGACCTGGACCCCGTCATGGACCTGTTAGCGCTGTATCAGGGGCACCTGGCCAACTTCCCCGACATCATCCACGTTCAGAAAGGAGCTCTTACCAAAGTAAAGGAGAGTAGGCGACACGTGGAAGAAGGGAAGATGGAGGTCCAAAAGGCTGATGGCATTCAGGATCGCTGTAACACTATTTCTTTTGCCACTTTGGCAGAAATTCACCACTTCCATCAAATTCGAGTAAGAGACTTTAAATCACAGATGCAGCATTTCTTACAACAACAAATAATATTTTTCCAAAAAGTGACGCAGAAGTTGGAAGAGGCTCTTCACAAATATGATAGTGTTTAA

Related Sequences

bmy_18855T0 SequenceType object (3)

Length: 626 aa      View alignments
>bmy_18855T0
MALRARALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGINSRGDRGLFPASYVQVIRAPEPGPAGDGGPGAPARYANVPPGGFEPLPAAPPASFKPPPDAFQPLLQPQQAPPPSTFQPPGAGFSYGGGALQPSPQQLYGGGYQASQGSDDDWDDEWDDSSTVADEPGVLGSGAYPDLDGSSSGGVGVAGRYRLSTRSDLSLGSRGGSAPPQHHPSGAKSSATVSRNLNRFSTFVKSGGEAFVLGEASGFVKDGDKLCVVLGPYGPEWQENPYPFQCTIDDPTKQTKFKGMKSYISYKLVPTHTQVPVHRRYKHFDWLYARLAEKFPVISVPHLPEKQATGRFEEDFISKRRKGLIWWMNHMASHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTPPAAALDLQEVESKIDGFKCFTKKMDDSALQLNHTANEFARKQVTGFKKEYQKVGQSFRGLSQAFELDQQAFSAGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFPDIIHVQKGALTKVKESRRHVEEGKMEVQKADGIQDRCNTISFATLAEIHHFHQIRVRDFKSQMQHFLQQQIIFFQKVTQKLEEALHKYDSV*