Sequence detailsbmy_18862 (Coding sequence)

Part of scaffold_1873 (SequenceType object (1))

For more information consult the page for scaffold_1873 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SCARB1ENSBTAG00000014269 (Cow)

Gene Details

Scavenger receptor class B member 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000016321, Cow)

Protein Percentage 84.92%
cDNA percentage 87.51%
Ka/Ks Ratio 0.21171 (Ka = 0.0875, Ks = 0.4134)

Additional orthologs identified in other species via the OPTIC pipeline.

SCARB1 (Human)   Scarb1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1356 bp    Location:236722..195281   Strand:-
Raw sequence 
>bmy_18862
ATGCCTCTGGTCCTGTGGATCAAAGTTATCCTGTGGATCGCAAGCAGTGCAAAGTCCAACCCCCACTGGAGGTGGGGCAGTGACAGGGGGAGGAGGAAGGGCTGGTCACTTCGTGCCAGGGAGTTCAGACACAAGAGCAACATCACCTTCAATGACAACGACACGGTGTCCTTCCTCGAGTACCGCAGCTTCCAGTTCCAGCCTGACAAGTCCCGCGGCCTGGAGAGCGACAATATCGTCATGCCCAACATCCTGGTCTTGAGTGCAGCAATGATGATGGAGAATGGGCCCATGAGCCTGAAGCTGATCATGACCTTGGCGTTCAGCACCCTTGGTGAACGTGCCTTCATGAACCGCACTGTCAGCGAGATCATGTGGGGCTACGAGGACCCCCTCATCCACCTCATCAATAAGTACTTCCCAAACATGTTCCCCTTCAAGGGCAAGTTCGGGTTATTTGCTGAGCTCAACAACTCTGATTCCGGGCTCTTCACCGTGTTCACGGGGGTCAAAAACTTCAGCAGGATCCATCTCGTGGACAAGTGGAACGGGGTCAGCAAGGTCAACTTCTGGCATTCCGATCAGTGCAACATGATTAACGGGACTTCCGGGCAGATGTGGGCACCATTTATGACTCCTGAATCCTCGCTGGAATTCTACAGCCCCGAGGCCTGCCGGTCCATGAAGCTCATCTACAAGGAGCAGGGGGTGTTCGAAGGCATCCCCACCTTTCGCTTCGTGGCTCCCAACACCTTATTTGCCAACGGGTCCGTCTACCCGCCCAATGAGGGCTTCTGCCCATGCCGGGAGTCCGGAATTCAGAACGTCAGCACCTGCAGGTTCAACGCACCCTTATTTCTCTCCCATCCTCACTTCTACAACGCTGACCCAGTCCTGGCAGAGGCAGTGTCTGGCCTCCACCCTAACCCAGAAGAGCATTCCTTGTTCCTGGACATCCACCCGGTCACCGGAATCCCCATGAACTGCTCTGTGAAACTGCAGCTGAGCCTCTACATKAAGTCTGTGAAAGGCATCGGACAAACTGGGAAGATCGAGCCGGTGATCCTGCCACTGATGTGGTTTGGAGAGAGCGGGRCAATGGAGGGTGAGACCCTTCAGACGTTCTACACCCAGCTGGTGTTGATGCCCAAGGTGCTGCATTATGCCCAGTACGTGATCCTTGCCCTGGGCTGCGTCCTGCTGCTCATCCCCATCGTCTACCAAATCCGGAGCCAAGGTCCCAAAGATGCCGCTAGCCAGCCCAGCCTGGCTACTCAGCCAGACCAGCTCTCCAGCCCCTACACCCCGCTTCTTCAGGACTCTCTCAGCGGACAGCCCACTAATCCCAAAGTCTGA

Related Sequences

bmy_18862T0 SequenceType object (3)

Length: 452 aa      
>bmy_18862T0
MPLVLWIKVILWIASSAKSNPHWRWGSDRGRRKGWSLRAREFRHKSNITFNDNDTVSFLEYRSFQFQPDKSRGLESDNIVMPNILVLSAAMMMENGPMSLKLIMTLAFSTLGERAFMNRTVSEIMWGYEDPLIHLINKYFPNMFPFKGKFGLFAELNNSDSGLFTVFTGVKNFSRIHLVDKWNGVSKVNFWHSDQCNMINGTSGQMWAPFMTPESSLEFYSPEACRSMKLIYKEQGVFEGIPTFRFVAPNTLFANGSVYPPNEGFCPCRESGIQNVSTCRFNAPLFLSHPHFYNADPVLAEAVSGLHPNPEEHSLFLDIHPVTGIPMNCSVKLQLSLYXKSVKGIGQTGKIEPVILPLMWFGESGXMEGETLQTFYTQLVLMPKVLHYAQYVILALGCVLLLIPIVYQIRSQGPKDAASQPSLATQPDQLSSPYTPLLQDSLSGQPTNPKV*