Part of scaffold_1908 (Scaffold)

For more information consult the page for scaffold_1908 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TTC39B ENSTTRG00000002267 (Bottlenosed dolphin)

Gene Details

tetratricopeptide repeat domain 39B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002139, Bottlenosed dolphin)

Protein Percentage 87.56%
cDNA percentage 90.08%
Ka/Ks Ratio 0.50786 (Ka = 0.0894, Ks = 0.176)

TTC39B ENSBTAG00000003943 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000032361, Cow)

Protein Percentage 94.49%
cDNA percentage 92.66%
Ka/Ks Ratio 0.14772 (Ka = 0.0329, Ks = 0.2226)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2046 bp    Location:95321..208235   Strand:+
>bmy_18881
ATGCTATGGGGCGGGGAGTGGTCCTCACTGAGGAGGAAGGTGTCGACAGAGCCCCATCAGACCTTGTCATCCCTCCCTAAAGAACAACAGTTAAATGAGAACATGGTGGCTTCAGCTCTCAGACCCATTGAAGTCATCCATATGAGAGAGGGAAAAATGGAGGAAGAGGCAGAGGAGGAAGATGAGGAGGAGGAGAATAAGGAGGACATCTTTGAAGATGCCTTGGAAACCCTCTCTATGTCACTGTCAACCAAGGTGGATCTCAGAAGTGGCCTGGAAGAATGTGCAATGGCACTGAACTTATTTCTAAGTAACAAATTTACAGATGCCTTAGAATTGCTTCGACCATGGGCTAAGGAGAGCATGTACCACGCCTTGGGCTACAGTACCATTATGGTGCTTCAGGCCGTCATGACCTTCGAGCAACAGGACATCCAAAATGGCATTTCTGCCATGAAGGACGCCTTACAAACCTGCCAAAAATACAGGAAAAAATGCACAGTCGTAGAATCTTTCTCAAGTCTTCTTTCTAGAGGATCATTGGAACAGCTGACTGAAGAGGAAATGCATGCCGAAATCTGTTATGCCGAGTGCCTCCTACAGAAAGCAGCCCTCACGTTTGTGCAGGATGAAAATATGATCAACTTCATCAAAGGTGGACTCAAAATTAGAACAAGTTACCAAATATATAATGTCATAGTAAACTTACAGTATAACTGTTTTCTTCAATCCAGAGAATGTCTTTCTATTCTGCATGTAATTCAGAAGAACAAAGGTGAGCAGCAACTCTTCTATGAGTTTGAAGGTGGCGTCAAGCTTGGCATCGGGGCCTTTAATTTGATGCTGTCCCTTTTACCAGCACGGATCATCAGACTACTAGAATTTATAGGATTTTCTGGAAATAGGGAGTTGGGCATCCTGCAGTTACGGGAAGGCGCCTTAGGAAGAAGCATGAGGTCTCCACTATGCTGCTTAACTATACTAGCTTTTCATACTTATATCTCCCTGATACTTGGTACAGGAGAAGTGAATGTTGTGGAAGCAGAGACTCTCCTTGAACCCTACCTCCAGCAGTTTCCAAATGGCTCCCTCATGTTGTTTTATCATGGCCGGATAGAGCTGCTGAAAGGAAATGTGGAAGAGGCACAAGAGATATTTCGAAAATGCATTTCAGTTCAAGAAGAATGGAAACAGTTTCACCATCTCTGTTATTGGGAGCTGATGTGGATTTTTGTATTCCAACAAAACTGGAGGGAGGCGTATTACTATTCAGATCTGCTTTGCAAAGAGAGTAAATGGTCCAAGGCAACATATGTGTTCTTAAAAGCTGCAATTTTGAGTATGCTTCCAGAGGAAGATGTAGTAGCAACTAAAGAGGATGTGGTAACTTTATTTAGACAGGTGGATGGCTTGAAGCAGAGAATTGCTGGGAAATCGATCCCTACTGAGAAGTTTGCTGTGAGGAAGGCTCGACGTTACTCTCCCTCATTGCCCGCACCCGTGAAGCTCATCTTGCCTGCCCTGGAAATGATGTATGTTTGGAATGGTTTTCCACTAGTGAGCAAAAGAAAAGATCTTTCTGAAAATCTGTTGGTAACTGTTGAAAAGGCTGAGGCAGATCTACAAAGTGAAAGGAAACGAGTGGATGAGAAGGCTCAAGAAACTGGGACCAAAAGGAGGAACTCAAAGTTTGTACTATTTAACAAAGAACCAAAACAACACTCCAGCGACTACTCTGTAGATGACGAATGCTTAGTGAAGTTGCTGAAAGGATGCTGCCTGAAGAACTTACAGCGGCCTTTGCAAGCAGAATTGTGTTTCAATCACGTTGTCCAAAGTGAAAAGCTACTGAAGTATGACCACTACCTAGTGCCATTTACTCTGTTTGAGTTGGCATTTTTGTATAAAAACCAAGGGGAAATTGACAAGGCCATAAAGGTCCTAGAAACTGCAAGAAATAACTACAAGGATTACTCACTGGAGTCCAGACTACACTTCAGAATTCAGGCAGCTCTTCACCTCTGGAAAAAATCTTCCTCAGATTGA

Related Sequences

bmy_18881T0 Protein

Length: 682 aa      View alignments
>bmy_18881T0
MLWGGEWSSLRRKVSTEPHQTLSSLPKEQQLNENMVASALRPIEVIHMREGKMEEEAEEEDEEEENKEDIFEDALETLSMSLSTKVDLRSGLEECAMALNLFLSNKFTDALELLRPWAKESMYHALGYSTIMVLQAVMTFEQQDIQNGISAMKDALQTCQKYRKKCTVVESFSSLLSRGSLEQLTEEEMHAEICYAECLLQKAALTFVQDENMINFIKGGLKIRTSYQIYNVIVNLQYNCFLQSRECLSILHVIQKNKGEQQLFYEFEGGVKLGIGAFNLMLSLLPARIIRLLEFIGFSGNRELGILQLREGALGRSMRSPLCCLTILAFHTYISLILGTGEVNVVEAETLLEPYLQQFPNGSLMLFYHGRIELLKGNVEEAQEIFRKCISVQEEWKQFHHLCYWELMWIFVFQQNWREAYYYSDLLCKESKWSKATYVFLKAAILSMLPEEDVVATKEDVVTLFRQVDGLKQRIAGKSIPTEKFAVRKARRYSPSLPAPVKLILPALEMMYVWNGFPLVSKRKDLSENLLVTVEKAEADLQSERKRVDEKAQETGTKRRNSKFVLFNKEPKQHSSDYSVDDECLVKLLKGCCLKNLQRPLQAELCFNHVVQSEKLLKYDHYLVPFTLFELAFLYKNQGEIDKAIKVLETARNNYKDYSLESRLHFRIQAALHLWKKSSSD*