Part of scaffold_1889 (Scaffold)

For more information consult the page for scaffold_1889 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VANGL1 ENSTTRG00000003109 (Bottlenosed dolphin)

Gene Details

VANGL planar cell polarity protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002913, Bottlenosed dolphin)

Protein Percentage 76.61%
cDNA percentage 76.88%
Ka/Ks Ratio 0.33286 (Ka = 0.0492, Ks = 0.1477)

VANGL1 ENSBTAG00000005788 (Cow)

Gene Details

vang-like protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007608, Cow)

Protein Percentage 92.91%
cDNA percentage 91.29%
Ka/Ks Ratio 0.16147 (Ka = 0.0469, Ks = 0.2905)

VANGL1  (Minke Whale)

Gene Details

VANGL planar cell polarity protein 1

External Links

Gene match (Identifier: BACU018710, Minke Whale)

Protein Percentage 94.76%
cDNA percentage 95.03%
Ka/Ks Ratio 0.40396 (Ka = 0.04, Ks = 0.0991)

Genome Location

Sequence Coding sequence

Length: 807 bp    Location:93662..101285   Strand:+
>bmy_18907
GACCTGCTTGGAAAAACTGCATTAATTTTGCCTTCTTTTCTCAGTATCCAGCGAGCAGCATTGGTGGTTCTGGAAAATTACTATAAAGATTTCACCATCTATAACCCCAACCTCCTAACAGCCTCCAAATTCCGAGCAGCCAAGCACATGGCYGGGCTGAAAGTCTACAACGTAGATGGCCCCAGTAACAACGCCACTGGTCAGTCCCGGGCAATGATCGCCGCAGCTGCTCGGCGCAGGGACTCGAGCCACAACGAGCTGTATTATGAGGAGGCGGAACATGAACGGCGGGTGAAGAAGCGGAGAGCAAGGCTGGTGGTTGCAGTGGAGGAGGCCTTCATCCACATCCAGCGTCTCCAGGCTGAGGAGCAGCAGAAAGCCCCAGGGGAGGTGATGGACCCCAGGGAGGCCGCCCAGGCCATCTTCCCCTCCATGGCCCGGGCTCTGCAGAAGTACCTGCGCACCACCCGGCAACAGCACTACCACAGCATGGAGAGCATCCTGCAGCACCTGGCCTTCTGCATCACCAACAGCATGACCCCAAAGGCCTTCCTCGAGCGATACCTCAGCACGGGCCCCACGCTGCAGTACGACCGGGAGCGCTGGCTCGCCATGCAGTGGCGGCTTGTCAGTGATGAGGCCGTGACCAGCGGGCTGCGGGATGGACTCGTTTTTGTCCTCAAATGCTTGGACTTCAGCCTCGTAGTCAATGTGAAGAAAATCCCGTTCATCATGCTCTCGGAAGAGTTCATAGACCCCAAGTCTCACAAATTTGTCCTTCGCTTACAGTCCGAGACATCGGTTTAA

Related Sequences

bmy_18907T0 Protein

Length: 269 aa      View alignments
>bmy_18907T0
DLLGKTALILPSFLSIQRAALVVLENYYKDFTIYNPNLLTASKFRAAKHMAGLKVYNVDGPSNNATGQSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRRARLVVAVEEAFIHIQRLQAEEQQKAPGEVMDPREAAQAIFPSMARALQKYLRTTRQQHYHSMESILQHLAFCITNSMTPKAFLERYLSTGPTLQYDRERWLAMQWRLVSDEAVTSGLRDGLVFVLKCLDFSLVVNVKKIPFIMLSEEFIDPKSHKFVLRLQSETSV*