Part of scaffold_1891 (Scaffold)

For more information consult the page for scaffold_1891 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLCN5 ENSTTRG00000010363 (Bottlenosed dolphin)

Gene Details

chloride channel, voltage-sensitive 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009883, Bottlenosed dolphin)

Protein Percentage 99.72%
cDNA percentage 98.84%
Ka/Ks Ratio 0.04175 (Ka = 0.0014, Ks = 0.0336)

BT.93167 ENSBTAG00000001507 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001973, Cow)

Protein Percentage 98.89%
cDNA percentage 95.74%
Ka/Ks Ratio 0.04725 (Ka = 0.0068, Ks = 0.1438)

CLCN5  (Minke Whale)

Gene Details

chloride channel, voltage-sensitive 5

External Links

Gene match (Identifier: BACU009761, Minke Whale)

Protein Percentage 99.72%
cDNA percentage 99.17%
Ka/Ks Ratio 0.06331 (Ka = 0.0014, Ks = 0.0223)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2163 bp    Location:75995..46623   Strand:-
>bmy_18955
ATGATGGACTTCTTGGAGGAGCCAATCCCTGGTGTGGGGACCTATGATGATTTCAATACAATTGATTGGGTGAGAGAGAAGTCTCGAGACCGGGATAGGCACCGAGAGATTACCAATAAAAGCAAGGAGTCAACATGGGCCTTAATTCACAGTGTGAGCGATGCTTTCTCTGGCTGGTTGTTGATGCTACTTATTGGGCTTTTATCAGGTTCCCTAGCTGGCTTGATAGACATCTCTGCTCACTGGATGACAGACCTAAAAGAAGGTATATGCACAGGGGGAATCTGGTTTAACCATGAACACTGTTGCTGGAACTCCCAGCACGTCACCTTTGAAGACAGAGACAAATGCCCAGAGTGGAATAGCTGGTCCCAGCTGATCATCAGTACGAATGAGGGAGCCTTTGCCTACATAGTCAATTACTTCATGTATGTCCTCTGGGCTCTCCTATTTGCCTTCCTTGCCGTATCTCTTGTCAAGGTGTTTGCACCGTACGCCTGTGGCTCCGGAATCCCTGAGATAAAAACTATCTTGAGTGGTTTCATTATTAGGGGCTATTTGGGTAAGTGGACCCTGATTATCAAAACCATAACACTGGTGCTGGCAGTGTCATCTGGCCTGAGCTTGGGCAAAGAGGGCCCMCTAGTCTTGTCAGCTGCAGCTGCAGCCGGTGTATCTGTAGCCTTTGGGGCACCTATTGGCGGAGTATTATTCAGCCTAGAAGAGGTCAGCTACTACTTTCCCCTCAAAACACTGTGGCGTTCGTTTTTTGCTGCTTTAGTGGCAGCATTCACTCTACGCTCCATCAATCCGTTTGGGAACAGCCGCCTGGTTCTATTTTATGTGGAGTTTCACACCCCGTGGCATCTCTTTGAGCTCGTGCCCTTCATTCTGTTGGGCATATTTGGTGGTCTGTGGGGAGCTTTGTTTATCCGCACCAACATCGCCTGGTGTCGGAAGCGTAAGACCACCCAGTTGGGCAAGTATCCTGTCATAGAGGTACTCGTCGTGACGGCCATCACTGCCATCCTGGCTTTCCCCAATGAGTACACCCGTATGAGCACAAGTGAGCTCATTTCTGAGCTGTTCAATGACTGTGGCCTTCTGGACTCCTCTAAGCTCTGTGATTATGAGAACCGTTTCAACACAAGCAAGGCGGGTGAGCTGCCCGACAGACCGGCTGGTGTGGGAGTCTACAGCGCGATGTGGCAGCTAGCCTTGACACTCATACTGAAAATTGTCATCACTATATTCACCTTTGGCATGAAGATCCCTTCTGGCCTCTTTATCCCTAGCATGGCTGTTGGTGCTATAGCGGGTCGGCTTTTGGGAGTAGGGATGGAACAGCTGGCTTATTACCACCATGACTGGGCCATCTTCAATAGCTGGTGCAGTCAAGGAGCAGATTGTATCACCCCTGGCCTTTATGCAATGGTTGGGGCTGCAGCCTGCTTGGGTGGGGTGACTCGGATGACCGTTTCTCTTGTTGTCATAATGTTTGAACTAACTGGTGGCTTGGAATACATTGTGCCTCTGATGGCCGCAGCCATGACAAGCAAGTGGGTGGCAGATGCTCTTGGGCGGGAGGGCATCTATGATGCCCACATCCGTCTCAATGGATACCCCTTTCTTGAAGCCAAAGAAGAGTTTGCTCACAAGACCCTGGCAATGGATGTGATGAAACCCCGGAGAAATGATCCTTTGTTGACTGTCCTTACTCAGGACAGTATGACCGTGGAAGACGTAGAGACCATAATCAGTGAAACCACTTACAGTGGCTTCCCAGTTGTGGTGTCCCGGGAGTCCCAAAGACTTGTGGGTTTTGTCCTCCGAAGAGACCTCATTATTTCAATTGAAAATGCTCGAAAAAAACAGGATGGAGTTGTGAGCACTTCTGTCATTTATTTCACCGAGCATTCTCCTCCAATGCCACCATACACCCCACCTACCCTCAAGCTTCGGAACATCCTGGATCTCAGCCCCTTCACTGTGACTGACCTTACACCCATGGAGATCGTGGTAGATATCTTCCGCAAGCTGGGACTGCGGCAGTGCCTGGTTACACACAATGGGCGATTGCTTGGAATCATTACCAAAAAGGATGTGCTAAAGCATATAGCACAGATGGCGAACCAAGATCCTGATTCCATTCTCTTCAACTAG

Related Sequences

bmy_18955T0 Protein

Length: 721 aa      View alignments
>bmy_18955T0
MMDFLEEPIPGVGTYDDFNTIDWVREKSRDRDRHREITNKSKESTWALIHSVSDAFSGWLLMLLIGLLSGSLAGLIDISAHWMTDLKEGICTGGIWFNHEHCCWNSQHVTFEDRDKCPEWNSWSQLIISTNEGAFAYIVNYFMYVLWALLFAFLAVSLVKVFAPYACGSGIPEIKTILSGFIIRGYLGKWTLIIKTITLVLAVSSGLSLGKEGPLVLSAAAAAGVSVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFTLRSINPFGNSRLVLFYVEFHTPWHLFELVPFILLGIFGGLWGALFIRTNIAWCRKRKTTQLGKYPVIEVLVVTAITAILAFPNEYTRMSTSELISELFNDCGLLDSSKLCDYENRFNTSKAGELPDRPAGVGVYSAMWQLALTLILKIVITIFTFGMKIPSGLFIPSMAVGAIAGRLLGVGMEQLAYYHHDWAIFNSWCSQGADCITPGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLEYIVPLMAAAMTSKWVADALGREGIYDAHIRLNGYPFLEAKEEFAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTSVIYFTEHSPPMPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGIITKKDVLKHIAQMANQDPDSILFN*