Part of scaffold_1925 (Scaffold)

For more information consult the page for scaffold_1925 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

OTOL1 ENSTTRG00000011969 (Bottlenosed dolphin)

Gene Details

otolin 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011345, Bottlenosed dolphin)

Protein Percentage 97.26%
cDNA percentage 97.89%
Ka/Ks Ratio 0.33849 (Ka = 0.0135, Ks = 0.0398)

OTOL1 ENSBTAG00000018489 (Cow)

Gene Details

otolin-1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024606, Cow)

Protein Percentage 86.89%
cDNA percentage 89.78%
Ka/Ks Ratio 0.31327 (Ka = 0.0706, Ks = 0.2254)

OTOL1  (Minke Whale)

Gene Details

otolin 1

External Links

Gene match (Identifier: BACU012277, Minke Whale)

Protein Percentage 98.17%
cDNA percentage 98.17%
Ka/Ks Ratio 0.19516 (Ka = 0.0077, Ks = 0.0395)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1431 bp    Location:52927..69243   Strand:+
>bmy_18989
ATGTGGATATTTTCTTGGTTTTGTGCCATTTTAATTATTTTGGCTATTGCTGGTGTGGACACAATAGTAAAGACCACACCATATACCAAGTTCACGAAGAAGTCTGAGGGAAAAGAGATGCCAAAGGGTCCAAAGCTGTCCAGTGGCCAGCCTCCAGAAGAAGAAGAAACTCCCTTCACAGAAGCGGCTGAAATGGCAGAACCAACCCCTGACCCCTCAGCTTTCAATTCTGTCTTTGGTGCTGCCACCCTCTTCCCCTCTGAAAACCTCACTCTTGACACGGCTGATTTCTTCTTGAATTGCTGTGATTGTTGTTCATCTGGACCAGGGCAAAAAGGAGAACCTGGAGAGACTGGAAAGCCAGGTTTTAAGGGAGAAGCTGGTGATATGGGGATCCTAGGGCCACCAGGAGTCACTGGACCCCAAGGTCCAAAAGGCCAGAAAGGAGAGAAGGGACTTAAGGGAGAACGTGGGGAACAAGGAACAAATGGAGTTCCAGGATACCCAGGAAAACCTGGAGAACCAGGTGGACTTGGTCCTAAGGGGGATAGAGGAAACATTGGCCTGGCAGGAGTGAAAGGACAAAAAGGCTCGAAGGGGGACACGTGTGCCAATGGTACCAAAGGAGAGAAAGGAGAKAAAGGMGACCAAGGGGCTGTGGGTGCACCAGGCTTGAATGGAGAGCCTGGGGCCAAGGGAGACAAGGGGGAGATGGGGGTTAAGGGCTACTGTGGAGATTCTGGGGAGAGGGGGGGAAAAGGAGAAAAAGGTGAGGAGGGCATGAAAGGAGAAAAAGGTAGCAAAGGAGATATTGGAACGGAAGGGAAAAGTGGTTCAGAAGGGCTGCCTGGAGCCCAAGGTGATCCAGGAGTTAAAGGAGAAAAGGGAGAGTTGGGTCCCCCTGGTCTTGTGGGACCTGCAGGGCCAAAGGGTGAACTTGGGAGCAAAGGGGTCCGAGGGTCTATTGGGAAGAAGGGCTCTCGGGGCCTCAAGGGCTCCAAGGGGGAGGTGGCCAGAGTCCCACGGTCAGCTTTCAGTGCTGCTTTATCCAAGCCTTTCCCTCCTCCAAATGCCCCTATCAAGTTTGACAAGGTTCTCTATAACGACCAAGGGAACTACAGCCCTGTCACTGGGAAATTTAACTGTAGTATTCCTGGGGCATATGTTTTTTCCTACCACGTCACCGTGAGGGGCCGACCTGCTCAGATCAGCCTGGTGGCCTGGAATAGGAAGCAGTTCAAGTCCAGAGAAACACTCTATGGTCATGAAATAGACCAGGCCTCTCTCCTCATCATCTTGAAATTAAAAGCAGGGGACCAAGTCTGGCTGGAAGTTTCAAAAGATTGGAATGGCGTGTATGTCAGTGCTGAGGATGATAGCATTTTTACTGGGTTCCTTTTGTACCCAGAGGAAAACCCTGGCATTTCACCA

Related Sequences

bmy_18989T0 Protein

Length: 477 aa      View alignments
>bmy_18989T0
MWIFSWFCAILIILAIAGVDTIVKTTPYTKFTKKSEGKEMPKGPKLSSGQPPEEEETPFTEAAEMAEPTPDPSAFNSVFGAATLFPSENLTLDTADFFLNCCDCCSSGPGQKGEPGETGKPGFKGEAGDMGILGPPGVTGPQGPKGQKGEKGLKGERGEQGTNGVPGYPGKPGEPGGLGPKGDRGNIGLAGVKGQKGSKGDTCANGTKGEKGXKGDQGAVGAPGLNGEPGAKGDKGEMGVKGYCGDSGERGGKGEKGEEGMKGEKGSKGDIGTEGKSGSEGLPGAQGDPGVKGEKGELGPPGLVGPAGPKGELGSKGVRGSIGKKGSRGLKGSKGEVARVPRSAFSAALSKPFPPPNAPIKFDKVLYNDQGNYSPVTGKFNCSIPGAYVFSYHVTVRGRPAQISLVAWNRKQFKSRETLYGHEIDQASLLIILKLKAGDQVWLEVSKDWNGVYVSAEDDSIFTGFLLYPEENPGISP