Part of scaffold_2006 (Scaffold)

For more information consult the page for scaffold_2006 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GPR180 ENSTTRG00000003929 (Bottlenosed dolphin)

Gene Details

G protein-coupled receptor 180

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003699, Bottlenosed dolphin)

Protein Percentage 97.85%
cDNA percentage 96.52%
Ka/Ks Ratio 0.25404 (Ka = 0.0195, Ks = 0.0769)

GPR180 ENSBTAG00000005310 (Cow)

Gene Details

integral membrane protein GPR180 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006985, Cow)

Protein Percentage 93.87%
cDNA percentage 93.46%
Ka/Ks Ratio 0.27511 (Ka = 0.0402, Ks = 0.146)

GPR180  (Minke Whale)

Gene Details

G protein-coupled receptor 180

External Links

Gene match (Identifier: BACU017470, Minke Whale)

Protein Percentage 98.47%
cDNA percentage 97.65%
Ka/Ks Ratio 0.41983 (Ka = 0.0166, Ks = 0.0396)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 981 bp    Location:335749..307891   Strand:-
>bmy_19002
ATGGGGGGGCTGCGGCTGCTGGCGGTGGCCCTCACCTGCTGCTGGTGGCCACCCGGCAGCCAGGGTAAGACGCTGCGAGGCAGCTTCAGCAGCGCCGCGGCCCGAGACGCTCACGGCCAGAGCATCGGCCACTTCGAGTTCCACGGTGACCACGCTCTTCTCTGTGTCAGAATCAATGACATAGCAGTAGCCATTGGAAAGGAAGCTAAACTCTACCTGTTCCAAGCCCAGGAATGGCTAAAGCTGCAGGAAAGCGGTCACGGTTATAGTTGTAGTGAAAAATTATCCAAAGCTCAGTTGACAAGGTTACATGAGTTCTTTTTCCTCCTAGTCCTAGTGTACTTTGTGATTGCTTGCATTTATGCGCAATCATTGTGGCAGGCWATTAAGAAAGGAGGACCCATGCACGTGGTTTTAAAGGTTCTGACAACTGCATTGCTGTTACAAGCTGGTTCAGCTTTCGCTAATTACATTCATTTCTCCAGTTACTCCAAAGATGGAATAGGGGTACCTTTTATGGGAAGTTTGGCAGAATCCAGCTTCCCCTGCAGTAGTATCTTGCTACTTTGGGAACAGTTTGAAGATACCAGTCCTCACAGCCACCATTCACATCACAACTTAGCAGGGATCCTTCTAATTGTTTTAAGAATTTGCCTAGCATTGTCATTAGGCTGTGGACTCTACCAGATCATCACAGTGGAAAGAAGTACACTCAAAAGGGAGTTCTATATCACTTTTGCCAAAGGCTGTATCTTGTGGTTTTTGTGCCATCCAGGTCTTGCATGCATTTCTATCATTTTTAATGACTACCAAAGAGATAAGGTCATTACAGTAGGCGTTATCCTTTGCCAGTCTGTTTCCATGGTGATTCTCTACAGACTCTTTCTATCCCACAGTCTATACTGGGAAGTTTCTTCACTTTCCTCAGTAACACTGCCACTGACCATATCATCTGGACACAAAAGTCGGCCTCACTTCTGA

Related Sequences

bmy_19002T0 Protein

Length: 327 aa      View alignments
>bmy_19002T0
MGGLRLLAVALTCCWWPPGSQGKTLRGSFSSAAARDAHGQSIGHFEFHGDHALLCVRINDIAVAIGKEAKLYLFQAQEWLKLQESGHGYSCSEKLSKAQLTRLHEFFFLLVLVYFVIACIYAQSLWQAIKKGGPMHVVLKVLTTALLLQAGSAFANYIHFSSYSKDGIGVPFMGSLAESSFPCSSILLLWEQFEDTSPHSHHSHHNLAGILLIVLRICLALSLGCGLYQIITVERSTLKREFYITFAKGCILWFLCHPGLACISIIFNDYQRDKVITVGVILCQSVSMVILYRLFLSHSLYWEVSSLSSVTLPLTISSGHKSRPHF*