Part of scaffold_2006 (Scaffold)

For more information consult the page for scaffold_2006 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TGDS ENSTTRG00000003928 (Bottlenosed dolphin)

Gene Details

TDP-glucose 4,6-dehydratase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003697, Bottlenosed dolphin)

Protein Percentage 71.96%
cDNA percentage 72.48%
Ka/Ks Ratio 0.34452 (Ka = 0.0169, Ks = 0.0491)

TGDS ENSBTAG00000005309 (Cow)

Gene Details

dTDP-D-glucose 4,6-dehydratase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006984, Cow)

Protein Percentage 96.95%
cDNA percentage 95.43%
Ka/Ks Ratio 0.08646 (Ka = 0.0139, Ks = 0.161)

TGDS  (Minke Whale)

Gene Details

TDP-glucose 4,6-dehydratase

External Links

Gene match (Identifier: BACU018819, Minke Whale)

Protein Percentage 93.29%
cDNA percentage 94.11%
Ka/Ks Ratio 0.82223 (Ka = 0.0595, Ks = 0.0723)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1296 bp    Location:336126..365103   Strand:+
>bmy_19003
ATGTGTGGGATTCGAAAAGAGCTAAGAAACACACAACAGCAACGTTTCTGCTACCCCAGTCACTCCAATCCTCCGAGGTGTTGGCGGAGAAGAGCTGCGCCTGCGCAGTGGCGCCGCGCGGCCCGCACACCCGGAGGCCCCGCCCAGCCCTCAGTGGGCGGGGACAAGTCAGCCCGAGTCCGGAAGCGGCCGCTGCCTGCCCCGTTAACGTGTCAGGGGAGGGAGACGCGTCGCAAAAAGTCGCGGTGGAACTTCCCTACGATCTACAAACCTGGCGTTTTACGGTTCCAGTCCCTGCTGAGCTGGGAGATGTCGGCTGCGGGACGGCCCGAGCCCTTGCGTCCTCCCGACGGCTTTGCGAAGCGGGTCCTGGTGACCGGGGGTGCTGGTTTCATTGCATCACATGTGATTGTCTCCTTAGTAGAAGATTATCCAAACTATATGATCATAAATCTAGACAAGCTGGATTACTGTGCAAGCCTGAAGAATCTTGAAACCATTTCTAATAAACAAAATTACAAATTTATACAGGGTGACATATGTGATTCTCACTTCGTGAAACTACTTTTTGAAACAGAGAAAATAGACATAGTACTACATTTTGCCGCACAAACACATGTAGATCTTTCGTTCGTCCGTGCCTTTGAGTTTACGTATGTTAATGTTTATGGCACTCACGTTTTGGAATTTGATGAATCTTCTCCCAAACAACCTACAAATCCTTATGCATCATCTAAAGCAGCTGCTGAGTGTTTTGTACAGTCTTACTGGGAACGATACAGGTTTCCAGTTGTCATCACACGAAGCAGTAATGTTTATGGACCACATCAATATCCAGAAAAGGTTATTCCAAAATTTATATCTTTACTTCAACACAACAGGAAATGCTGCATTCATGGATCAGGGCTTCAAACAAGAAACTTCCTTTATGCTACTGATGTAGTAGAAGCATTTCTCACTGTCCTCAAAAAGGGAAAACCAGGTGAAATTTATAACATTGGAACCAATTTTGAAATGTCAGTTCTCCAGCTTGCCAAAGAACTAATACAACTGATCAAAGAGACCAATTCAGAGTCTGAAATGGAAAACTGGGTTGATTATGTTAATGATAGACCTACCAATGACATGAGATATCCAATGAAATCAGAAAAAATACATGGCTTAGGATGGAGACCTAAAGTGCCTTGGAAAGAAGGAATAAAGAAAACAATTGAGTGGTACAGAGAGAATTTTCACAACTGGAAGAATGCAGAAAAGGCATTAGAACCCTTTCCAGTACAACCACCGTTTGTATAG

Related Sequences

bmy_19003T0 Protein

Length: 432 aa      View alignments
>bmy_19003T0
MCGIRKELRNTQQQRFCYPSHSNPPRCWRRRAAPAQWRRAARTPGGPAQPSVGGDKSARVRKRPLPAPLTCQGRETRRKKSRWNFPTIYKPGVLRFQSLLSWEMSAAGRPEPLRPPDGFAKRVLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLEFDESSPKQPTNPYASSKAAAECFVQSYWERYRFPVVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMKSEKIHGLGWRPKVPWKEGIKKTIEWYRENFHNWKNAEKALEPFPVQPPFV*