Part of scaffold_1963 (Scaffold)

For more information consult the page for scaffold_1963 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BST1 ENSTTRG00000012899 (Bottlenosed dolphin)

Gene Details

bone marrow stromal cell antigen 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012234, Bottlenosed dolphin)

Protein Percentage 72.28%
cDNA percentage 74.92%
Ka/Ks Ratio 0.47311 (Ka = 0.1324, Ks = 0.2799)

BST1 ENSBTAG00000006156 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008097, Cow)

Protein Percentage 80.0%
cDNA percentage 85.03%
Ka/Ks Ratio 0.33556 (Ka = 0.118, Ks = 0.3516)

BST1  (Minke Whale)

Gene Details

bone marrow stromal cell antigen 1

External Links

Gene match (Identifier: BACU020017, Minke Whale)

Protein Percentage 93.01%
cDNA percentage 94.44%
Ka/Ks Ratio 0.48171 (Ka = 0.0434, Ks = 0.0901)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 753 bp    Location:166989..152863   Strand:-
>bmy_19095
ATGGAAGCCCGGGGGTGCGCGTGGTCCCGGCGGCCGCTGCCGGCGCTGCTGCTGATCGTGCTGCTGCCGCCGGCCGCGGGCGCTGCAGGCGCTGCGGACGCGCGCTGGAGCGGGCAGGGCACCATCCCGCACCTGCAGAGCATCTTCCTGGGCCGCTGCGCGGAGTACATTGCGGTGCTGAGCCCCGAGCTGCGGGACAAGAACTGCACAGCCATCTGGGAAGCCTTTAAACTGGTGCTGGATAAGGATCCCTGTTCCGTGCTTCCCTCAGATTATGACCTTTTTATTAACCTCTCCAGGCACTCCATTCCCAGAGACAAGTCCCTGTTCTGGGAAAACAACCACGTCCTTGTCACCAGCTATGCGGAGAACGGCCGCCGCTTTATGCCACTGTGCAATGTTCTGTATGGCATGGTTGGAGATTTCTTGAGCTGGTGTCGACAGAAAAATGCCTCTGGACTCGATTACCAATCCTGCCCTACATCAGAAGATTGTGAAAACAATCCTGTGGATTCTTACTGGAAAAGTGCATCCATCCAGGATATTGTCACCAGAGTTGATAGCTATCGGTTTTTTGCAGATTTTGAAATTCCTCACTTACTGAAGGATAAAATCACACGCATTGAGATCTGGGTTATGCATGAAATCGGGGGATCCAATGTGGAATCCTGTGGAGAAGGCAGTGTGAAAATCCTGGAAGAGAGACTGCAGAARATGGGTTTCCAGTATAGCTGTATCAATGACTACAMGTAG

Related Sequences

bmy_19095T0 Protein

Length: 251 aa      View alignments
>bmy_19095T0
MEARGCAWSRRPLPALLLIVLLPPAAGAAGAADARWSGQGTIPHLQSIFLGRCAEYIAVLSPELRDKNCTAIWEAFKLVLDKDPCSVLPSDYDLFINLSRHSIPRDKSLFWENNHVLVTSYAENGRRFMPLCNVLYGMVGDFLSWCRQKNASGLDYQSCPTSEDCENNPVDSYWKSASIQDIVTRVDSYRFFADFEIPHLLKDKITRIEIWVMHEIGGSNVESCGEGSVKILEERLQKMGFQYSCINDYX*