Sequence detailsbmy_19104 (Coding sequence)

Part of scaffold_1966 (SequenceType object (1))

For more information consult the page for scaffold_1966 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PDCD11ENSTTRG00000003356 (Bottlenosed dolphin)

Gene Details

programmed cell death 11

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003151, Bottlenosed dolphin)

Protein Percentage 95.76%
cDNA percentage 96.68%
Ka/Ks Ratio 0.38773 (Ka = 0.0242, Ks = 0.0624)

BT.23141ENSBTAG00000009715 (Cow)

Gene Details

protein RRP5 homolog

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000012818, Cow)

Protein Percentage 91.1%
cDNA percentage 91.59%
Ka/Ks Ratio 0.21314 (Ka = 0.048, Ks = 0.2253)

Additional orthologs identified in other species via the OPTIC pipeline.

PDCD11 (Human)   Pdcd11 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3147 bp    Location:62912..20472   Strand:-
Raw sequence 
>bmy_19104
ATGGAAGAAAGCTTCCCCCGAGGGGGTACAAGAAAGACCCACAAATCAGAGAAAGAGAAAGCTTTCCAGCAGTCCTTTGAACAAGACAACTTATTTGATGACCTGGTCAGCTTGCCTGAGCTCTTCTCACCTGGGATGCTGGTGAGATGTGTGGTGAGCAGTCTGGGCATCACAAAGAGGGGCAAAAAGAATGTCAAGCTGTCTCTGAACCCCAGAAATGTCAACAAAGTGCTGAGTGCTGAGGCCCTGAAACCCGGCATGCTGCTCACGGGCACTGTGTCCAGCCTGGAAGACCATGGCTATCTAGTGGACATTGGTGTTAGTGGGGCCAGAGCTTTTCTGCCACTGCAGAAAGCCCAGGAGTACATCCAACAGAAGAACAAAGGTGCTAAATTGAAGGTAGGTCAGTACCTGAACTGCCTTATTGAAGAGGTGAAAGGCAGTGGAGGAGTCGTTAGTCTGTCTGTTGGTTACTCAGAAGTTTCTGCTGCCATTGCTACTGAGGAGCAAAACTGGACCCTCAACAGCTTGCTGCCAGGACTGGTAGTCAAAGCCCAGGTACAGAAGGTGACTCCATTTGGCCTTACGCTAAAATTCCTCTCGTTCTTCACTGGCCTGGTTGACTTCATGCACCTGGACCCTAAGAAAGCGAGAACGTATTTCTCAAATCAGCCAGTGCGGGCCTGTGTCCTCTGCGTCCATCCTCGGACCAGAGCTGTGCGGCTGAGCCTGCGCGCTGTCTTCCTGCAGCCCGGGCGTCCACTCACCCGGCTCTCTTGCCAGCAGCTGGGAGCTGTACTGGATGATGTTCCTGTCCAGGGCTTTTTCGGCAGTGCCGGGGCCACCTTCAGGCTGACGGATGGGGCTCTGGCCTATGCCCGGCTCAGCCATCTCTCCAATTCTAAGAAAGTCTTCAAACCTGAGACCTTCAAGCCAGGGAACACTCACAAGTGTAGAATCATCGACTACAGCCAAATGGATGAACTGGCTTTGCTCTCTCTGCGGACGTCTGTTATTGAAGCTCAGTTCCTTAGTTATCATGACATCAAACCTGGGGCCTTAGTAAAGGGCAAAGTGATGACCATAAAGCCATACGGGATGCTGGTGAAGGTGGGCAAGCAAATAAGGGGCCTGGTACCTCCCATGCACCTGGCTGACATCCTTATGAAGAATCCGGAGAAGAAGTACCACGCTGGGGATGAGGTCAAGTGCCGGAGTGACCACATAATATCTGCAGTCCTGCGCTTGGCATTGGGAAGAGAAAACTGGGTCCCTGCCCTTGATAATTGTATGGTTTTGCTTTGTGACCCTGAAGCCAGGAAGCTGATGATGACCCTGAAGAAAACCCTGGTTGAGTCCAAACTTCCTGCCATTACCTGCTATGCCGATGCTAAGCCTGGTCTGCAGACACACGGCTTTATCCTCAGGGTCAAGGACTACGGCTGCATTGTGAAGTTCTACAATGACGTGCGGGGACTGGTGCCCAGGCACGAGCTCAGTGCCGAGTATATCCCTGACCCAGAGAGTGTCTTTTACACTGGCCAGGGCCAAGCAGGTGTGGTTTCTCACCAGGTGGTGAAGGTTGCAGTGCTGAACTGTGAGCCATCCAAAGAGAGGATGCTCTTGTCCTTCAAGCTGTCAAGTGATCCGAAGAAAGAATGTACGGGACACAGTCAGAAGAAAAAAAAAGCCATTAACGCTGGGCAGTTGGTGGATGTGAAGGTTCTGGAGAAGACCAAAGATGGGCTGCAGGTGGCTGTCCTGCCTCACAACGTCCCCGGCTTCCTTCCCACGCCTCACCTGTCAGACCACGTCCCCCACGGCCCACTGTTGCATTGCTGGCTCCAGGCGGGCGACACCCTGCACAGAGTCCTGTGTCTGAGCGAGGGTGAGGAGCGTATTCTCCTTTGCAGGAAGCCAGCTTTGGTGTCCGCAGTAGAGGGCGGCAAGGATCCCAAGAGCTTCTCAGAAATCCATCCTGGAATGCTGCTCATTGGTTTTGTGAAGAACATCAAGGACTATGGTGTGTTCGTCCAGTTCCCGTCAGGCCTTAGTGGACTGGCTCCCAAAGCTATCATGAGTGACAAGTTTGTGACCTCCACAAGTGACCACTTTGTCGAGGGGCAGACGGTGGTTGCTAAGGTGACCAACGTGGACGAGGAGAAGCAGCGGATGCTGCTGTCGCTGCGGCTGTCGGACTGCGCTCTGGGGGACCTGGCCACCACCAGCCTCCTCCTCCTGAGCCAGTGCCTGGAGGAGCGGCAGGGCGTCCGTAGCCTCATGAGCAACCGAGACTCTGTGTTGATCCAGACGCTGGCTGAGATGACCCCAGGGATGGTCCTTGACCTAGAGGTGCAGGAGGTGTTGGGAGACGGCTCTGTACTGTTCAGTGAGGGCCCAGTGCCCGGCCTGGTCCTAAGAGCCAGCAAGTATCATCGGGCAGGGCAGGAGGTGGAATCTGGGCAGAAAAAGAAGGTTGTAATCTTAAATGTTGATATGTTGAAGTTGGAAGTACATGTTTCCCTCTGCCATGATTTGGTGAATAGAAAAGCTAAAAAGCTGAAGAAAGGCAGTGAGCACCAGGCGACTGTGCAGCACTTGGAGGAGTCCTTTGCCCTGGCCTCCTTGGTAGAGACTGGCCAGCTAGCAGCTTTCTCCCTGACCTCTCACCTCAATGACACCTTCCGCTTTGATTCAGAGAAGTTGCAGGTGGGACAGGGTGTCTCCCTAACCCTCCAGACCACAGAACCAGGAGTGACGGGTCTTCTTTTGGCCATTGAGGGGCCAGCTGCTAAGAGGACCATGAGGCAGACCCGGAAGGACTCTGAGACGGTCGACGAGGATGAGGAAGTAGATCCAGCTCTGGTTTTAGGGACTGTAAGGAAGCACACCCTGTCCATTGGGGACGTGGTCACAGGGACCGTCAAGTCCATTAAGCCCACCCATGTGGTTGTGACCCTGGAAGATGGCATCATTGGCTGCATCCATGCCTCCCACATTCTAGATGATGTTCCAGTGGGCACATCTCCTACTGCCAAGCTGAAAGTTGGGAAGAAGGTCACTGCCCGAGTGATTGGCGGGAGAGACATGAAGACATTCAAGTATGGAGGCTTTGGGGGAGGGACTGGCTTTGAGGGGAGATGGTGA

Related Sequences

bmy_19104T0 SequenceType object (3)

Length: 1049 aa      View alignments
>bmy_19104T0
MEESFPRGGTRKTHKSEKEKAFQQSFEQDNLFDDLVSLPELFSPGMLVRCVVSSLGITKRGKKNVKLSLNPRNVNKVLSAEALKPGMLLTGTVSSLEDHGYLVDIGVSGARAFLPLQKAQEYIQQKNKGAKLKVGQYLNCLIEEVKGSGGVVSLSVGYSEVSAAIATEEQNWTLNSLLPGLVVKAQVQKVTPFGLTLKFLSFFTGLVDFMHLDPKKARTYFSNQPVRACVLCVHPRTRAVRLSLRAVFLQPGRPLTRLSCQQLGAVLDDVPVQGFFGSAGATFRLTDGALAYARLSHLSNSKKVFKPETFKPGNTHKCRIIDYSQMDELALLSLRTSVIEAQFLSYHDIKPGALVKGKVMTIKPYGMLVKVGKQIRGLVPPMHLADILMKNPEKKYHAGDEVKCRSDHIISAVLRLALGRENWVPALDNCMVLLCDPEARKLMMTLKKTLVESKLPAITCYADAKPGLQTHGFILRVKDYGCIVKFYNDVRGLVPRHELSAEYIPDPESVFYTGQGQAGVVSHQVVKVAVLNCEPSKERMLLSFKLSSDPKKECTGHSQKKKKAINAGQLVDVKVLEKTKDGLQVAVLPHNVPGFLPTPHLSDHVPHGPLLHCWLQAGDTLHRVLCLSEGEERILLCRKPALVSAVEGGKDPKSFSEIHPGMLLIGFVKNIKDYGVFVQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVVAKVTNVDEEKQRMLLSLRLSDCALGDLATTSLLLLSQCLEERQGVRSLMSNRDSVLIQTLAEMTPGMVLDLEVQEVLGDGSVLFSEGPVPGLVLRASKYHRAGQEVESGQKKKVVILNVDMLKLEVHVSLCHDLVNRKAKKLKKGSEHQATVQHLEESFALASLVETGQLAAFSLTSHLNDTFRFDSEKLQVGQGVSLTLQTTEPGVTGLLLAIEGPAAKRTMRQTRKDSETVDEDEEVDPALVLGTVRKHTLSIGDVVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPVGTSPTAKLKVGKKVTARVIGGRDMKTFKYGGFGGGTGFEGRW*