Part of scaffold_1966 (Scaffold)

For more information consult the page for scaffold_1966 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

INA ENSTTRG00000003328 (Bottlenosed dolphin)

Gene Details

internexin neuronal intermediate filament protein, alpha

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003118, Bottlenosed dolphin)

Protein Percentage 90.38%
cDNA percentage 90.45%
Ka/Ks Ratio 0.12019 (Ka = 0.0055, Ks = 0.0461)

INA ENSBTAG00000002717 (Cow)

Gene Details

Alpha-internexin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003517, Cow)

Protein Percentage 96.99%
cDNA percentage 96.33%
Ka/Ks Ratio 0.0784 (Ka = 0.0126, Ks = 0.1604)

INA  (Minke Whale)

Gene Details

internexin neuronal intermediate filament protein, alpha

External Links

Gene match (Identifier: BACU012352, Minke Whale)

Protein Percentage 99.52%
cDNA percentage 99.2%
Ka/Ks Ratio 0.0629 (Ka = 0.002, Ks = 0.0323)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1596 bp    Location:159428..145472   Strand:-
>bmy_19108
CCGGTGCACACCGCTCCGCCGCATCCCGTCCGGCTCACCTCTCTTCTCCTCGTCAGCTCCAGCCGCAGCCGCTGTCCCGGTCCTGGTCCCGGCACCATGAGCTTCGGCTCGGAGCACTACCTGGGCGCCGCCTCCTCCTACCGCAAGGTGTTCGGAGACGGCTCGCGCCTGTCCTCGCGCCTCTCCGGGGCCGGCGGCGCGGGTAGCTTCCGCTCGCAATCGCTGTCCCGCTGCAATGTGGCCTCCTCGGCTGCCTGCTCCTCGGCCTCGTCGCTCGGCCTGGGCCTGGCCTACCGCCGGTCTCCGGCGTCCGACGGGCTGGACCTGAGTCAGGCGGCGGCGCGCACCAACGAGTACAAGATCATCCGCACTAACGAGAAGGAGCAGCTTCAGGGCCTCAACGACCGCTTTGCCATGTTCATCGAGAAGGTGCACCAGCTGGAGACGCAGAACCGCGCGCTCGAGGCCGAGCTGGCCGCGCTGCGGCAGCGCCACGCCGAGCCGTCGCGCCTCGGCGAGCTCTTCCAGCGCGAGCTGCGCGAGCTGCGCGCGCAGCTGGAGGAGGCGAGCTCGGCGCGCTCGCAGGCCCTGCTGGAGCGCGACGGGCTGGCGGAGGAGGTGCAGCGGCTACGGGCGCGCTGCGAGGAGGAGAGCCGGGGGCGCGAAGGGGCCGAGCGCGCCCTGAAGGCGCAGCAGCGCGACGTGGACGGCGCCACGCTGGCCCGCCTGGATCTGGAGAAGAAGGTGGAGTCGCTGCTGGACGAGCTGGCCTTCGTGCGCCAGGTGCACGACGAGGAGGTGGCCGAGCTACTGGCCACGCTGCAGGCGTCGTCGCAGGCCGCGGCCGAGGTGGACGTGGCTGTGGCTAAACCAGACCTGAGTTCGGCGCTGAGGGAGATCCGCGCCCAGTATGAGTCCCTGGCCGCCAAGAACCTGCAGTCAGCTGAGGAGTGGTACAAGTCCAAGTTTGCCAACCTGAACGAGCAGGCGGCGCGCAGCACCGAGGCCATCCGGGCCAGCCGCGAGGAGATTCACGAGTACCGGCGCCAGCTGCAGGCACGCACCATCGAGATCGAGGGGCTGCGCGGGGCCAACGAGTCCTTGGAGAGGCAGATCCTGGAGCTGGAGGAGCGGCACAGTGCCGAGGTGGCCAGCTACCAGGATAACATTGGGCAGCTGGAGAATGATCTGAGGAACACGAAGAGTGAGATGGCCCGCCACCTTCGGGAATACCAGGACTTGCTCAATGTCAAAATGGCTCTTGACATTGAGATAGCAGCTTACAGGAAACTGCTGGAAGGCGAAGAGACACGTTTTAGCACCAGTGGATTAAGCATTTCAGGGCTGAATCCACTTCCCAATCCAAGTTATCTGCTCCCTCCTAGAATCCTCAGTTCTACCACCTCCAAAGTCTCATCCACTGGGCTGTCTCTTAAGAAAGAGGAGGAGGAAGAGGAGGCTTCTAAGGTAGCCGCGAAGAAAACCTCCCAGTTAGGGGAAAGTTTTGAAGAAATATTGGAGGAGACAGTGATATCTGCTAAGAAAACCGAGAAATCAAATATAGAAGAAAACACCATTTCAAGCCAAAAAATATAA

Related Sequences

bmy_19108T0 Protein

Length: 532 aa      View alignments
>bmy_19108T0
PVHTAPPHPVRLTSLLLVSSSRSRCPGPGPGTMSFGSEHYLGAASSYRKVFGDGSRLSSRLSGAGGAGSFRSQSLSRCNVASSAACSSASSLGLGLAYRRSPASDGLDLSQAAARTNEYKIIRTNEKEQLQGLNDRFAMFIEKVHQLETQNRALEAELAALRQRHAEPSRLGELFQRELRELRAQLEEASSARSQALLERDGLAEEVQRLRARCEEESRGREGAERALKAQQRDVDGATLARLDLEKKVESLLDELAFVRQVHDEEVAELLATLQASSQAAAEVDVAVAKPDLSSALREIRAQYESLAAKNLQSAEEWYKSKFANLNEQAARSTEAIRASREEIHEYRRQLQARTIEIEGLRGANESLERQILELEERHSAEVASYQDNIGQLENDLRNTKSEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSTSGLSISGLNPLPNPSYLLPPRILSSTTSKVSSTGLSLKKEEEEEEASKVAAKKTSQLGESFEEILEETVISAKKTEKSNIEENTISSQKI*