Sequence details bmy_19123 (Coding sequence)

Part of scaffold_1941 (Scaffold)

For more information consult the page for scaffold_1941 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPTBN1 ENSTTRG00000004483 (Bottlenosed dolphin)

Gene Details

Beta-spectrin non-erythrocytic 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004247, Bottlenosed dolphin)

Protein Percentage 96.91%
cDNA percentage 96.85%
Ka/Ks Ratio 0.18476 (Ka = 0.019, Ks = 0.1031)

SPTBN1 ENSBTAG00000006995 (Cow)

Gene Details

spectrin beta chain, brain 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009208, Cow)

Protein Percentage 96.53%
cDNA percentage 93.16%
Ka/Ks Ratio 0.05997 (Ka = 0.0209, Ks = 0.3486)

SPTBN1  (Minke Whale)

Gene Details

spectrin, beta, non-erythrocytic 1

External Links

Gene match (Identifier: BACU013868, Minke Whale)

Protein Percentage 98.36%
cDNA percentage 98.44%
Ka/Ks Ratio 0.1717 (Ka = 0.0089, Ks = 0.0521)

Additional orthologs identified in other species via the OPTIC pipeline.

SPTBN1 (Human)   Sptbn1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 6228 bp    Location:225212..283673   Strand:+
Raw sequence 
>bmy_19123
ATGTGCTTTCACCTGAACCTTGAAAGTAAGTCACACCCTTTTACTCAACCCCCCTCCATCATCCTCACAAAACCAGCACTTGAAAATTCCGCTGATTGGCCTAAACCCACCAAGGGACGAATGCGCATCCACTGTCTGGAGAACGTGGACAAGGCCCTTCAGTTCCTGAAGGAGCAGCGAGTCCATCTTGAGAACATGGGGTCCCACGACATCGTGGATGGGAACCACCGGCTGACCCTCGGCCTTATCTGGACCATCATCCTGCGCTTCCAGATCCAGGATATCAGCGTGGAGACTGAAGACAACAAAGAGAAGAAATCTGCCAAGGATGCATTGCTGTTGTGGTGCCAGATGAAGACAGCTGGGTACCCCAACGTCAACATTCACAATTTCACCACTAGCTGGAGGGACGGCATGGCCTTCAATGCACTGATACACAAACACCGGCCTGACCTGATAGATTTTGACAAGCTAAAGAAATCCAATGCACACTACAATCTGCAGAATGCATTTAACCTTGCAGAGCAGCACCTCGGCCTCACTAAACTGTTGGACCCCGAAGATATCAGTGTGGACCACCCCGATGAGAAGTCCATTATCACTTACGTGGTGACTTATTACCACTACTTCTCAAAGATGAAGGCCTTGGCTGTTGAAGGAAAACGAATTGGAAAGGTGCTCGACAATGCTATTGAAACAGAAAAAATGATTGAAAAGTATGAATCCCTTGCCTCTGACCTTCTGGAGTGGATTGAACAAACCATCATTATTTTGAACAATCGCAAATTTGCCAACTCGCTGGTTGGTGTTCAACAACAGCTTCAGGCCTTCAACACCTACCGCACTGTGGAGAAGCCGCCCAAATTTACTGAGAAGGGGAACTTGGAAGTCCTGCTTTTCACTATTCAGAGCAAGATGAGGGCCAATAACCAGAAGGTCTACATGCCCCGGGAGGGGAAACTCATCTCTGACATTAACAAGGCCTGGGAAAGACTGGAAAAAGCGGAACACGAGCGAGAACTGGCCCTGCGGAACGAGCTCATAAGACAGGAGAAACTGGAACAGCTTGCCCGCAGATTCGACCGCAAGGCAGCTATGAGGGAGACCTGGCTGAGCGAGAACCAGCGTCTGGTGTCCCAGGACAACTTTGGATTTGACCTTCCCGCAGTCGAGGCTGCCACGAAGAAGCACGAGGCCATTGAGACGGACATTGCCGCGTACGAGGAGCGCGTGCAGGCCGTGGTGGCCGTGGCCAGGGAGCTGGAAGCGGAGAACTACCACGACATCAAGCGCATCGCGGCGAGGAAGGACAACGTCATCCGGCTCTGGGAGTACCTGCTGGAGCTGCTCAGGGCCCGGCGGCAGCGCCTCGAGATGAACCTGGGGCTGCAGAAGATATTCCAGGAAATGCTCTACATTATGGACTGGATGGATGAAATGAAGGTGCTATTATTGTCTCAAGACTATGGCAAACACTTGCTCGGCGTGGAAGACCTGTTACAGAAGCACGCCCTGGTTGAAGCGGACATTGGCATCCAGGCAGAACGTGTGAGAGGTGTCAATGCCTCCGCCCAGAAGTTTGCAACAGACGGGGAAGGTTACAAGCCCTGCGACCCCCAGGTGATCCGAGACCGCGTGGCCCACATGGAGTTCTGTTACCAAGAGCTTTGCCAGCTGGCGGCCGAGCGCCGGGCTCGCCTGGAAGAGTCCCGTCGCCTCTGGAAGTTCTTCTGGGAGATGGCCGAGGAGGAAGGCTGGATCCGGGAGAAGGAGAAGATCCTGTCCTCCGACGACTATGGCAAGGACCTCACCAGCGTCGTGCGGCTGCTCAGCAAGCACCGGGCGTTCGAGGACGAGATGAGCGGCCGCAGCGGCCACTTCGAGCAGGCCATCAAGGAGGGCGAAGACATGATCGCCGAGGAGCACTTCGGGTCGGAGAAGATCCGGGAGCGGATCGCCTACATTCACGAGCAGTGGGCCCACCTGGAGCAGCTCTCGGCCATCCGCAAGAAGCGCCTGGAGGAGGCCTCGCTGCTGCATCAGTTCCAGGCGGACGCCGACGACATCGACGCCTGGATGCTGGACATCCTCAAGATCGTCTCCAGCAGCGACGTGGGCCACGACGAGTACTCCACCCAGTCCCTGGTCAAGAAGCACAAGGACGTGGCAGAGGAGATCGCCAACTACCGGCCCACCATTGACTCGCTGCACGAGCAGGCCGGCGCCCTCCCCCAGGAGCACGCCGAGTCTCCCGATGTGCAGGGCCGACTGGCAGGCATCGAGGAGCGCTACAAGGAGGTGGCCGAGCTGACGCGGCTGCGGAAGCAGGCGCTGCAGGACACCCTGGCCCTGTACAAGATGTTCAGCGAGGCCGACGCCTGCGAGCTCTGGATCGACGAGAAGGAGCAGTGGCTCAACAACATGCAGATCCCAGAGAAGCTGGAGGACCTGGAGGTCATCCAGCACAGATTCGAGAGCCTAGAACCAGAGATGAACAACCAGGCTTCCCGGGTGGCGGTGGTGAACCAGATCGCGCGGCAGCTGATGCACAGCGGCCACCCGAGTGAGAAGGAGATCAAGGCCCAGCAGGACAAGCTCAACACGAGGTGGAGTCAGTTCAGGGAGCTGGTGGACCGGAAGAAGGACGCTCTCCTCTCCGCCCTGAGCATCCAGAACTACCACCTCGAGTGCAACGAAACCAAGTCCTGGATTCGGGAGAAGACCAAGGTCATTGAGTCCACCCAGGACCTGGGCAACGACCTGGCGGGAGTCATGGCCCTGCAGCGCAAGCTGACCGGCATGGAGCGGGACCTGGTGGCCATCGAGGCAAAGCTGAGCGACCTGCAGAAGGAGGCCGAGAAGCTGGAGTCCGAGCACCCCGACCAGGCCCAGGCCATCCTGTCTCGGCTGGCCGAGATCAGCGACGTGTGGGAGGAGATGAAGACCACGCTGAAGAACCGCGAGGCCTCCTTGGGAGAGGCCAGCAAGCTGCAGCAGTTCCTGCGGGACCTGGACGACTTCCAGTCCTGGCTCTCCAGGACCCAGACGGCCATCGCCTCGGAGGACATGCCCAACACCCTGACCGAGGCCGAGAAGCTCCTCACGCAGCACGAGAACATCAAAAACGAGATCGACAACTATGAGGAGGACTACCAGAAGATGAGGGACATGGGTGAGATGGTCACCCAGGGCCAGACCGACGCCCAGTACATGTTCTTGCGGCAGCGGCTGCAGGCCCTGGACACTGGGTGGAATGAGCTCCACAAGATGTGGGAGAACAGGCAGAACCTTCTCTCCCAGTCCCACGCCTACCAGCAGTTCCTGCGGGACACCAAGCAGGCCGAAGCCTTCCTTAACAACCAGGAGTATGTTTTGGCCCATACTGAAATGCCCACCACCTTGGAAGGAGCTGAAGCAGCTATTAAAAAACAAGAGGACTTCATGACCACCATGGACGCCAACGAGGAGAAGATCAATGCGGTTGTGGAGACAGGCCGGAGGCTGGTGAGCGATGGGAACATCAGTTCGGACCGCATCCAGGAGAAGGTGGACTCTATCGATGACAGACATAGGAAGAATCGTGAGGCAGCCAGTGAGCTTCTGATGAGACTGAAGGACAACAGGGATCTTCAGAAATTCCTGCAAGATTGTCAGGAGCTGTCTCTCTGGATCAATGAAAAGATGCTTACAGCCCAGGACATGTCTTATGATGAAGCCAGAAATCTGCACAGTAAATGGTTAAAACATCAAGCCTTTATGGCAGAACTCGCATCCAACAAAGAATGGCTTGACAAAATTGAGAAGGAAGGAATGCAGCTCATTTCAGAAAAGCCAGAGACGGAAGCCGTGGTGAAGGAGAAACTCACAGGTTTACATAAAATGTGGGAAGTCCTTGAGTCTACCACACAGACCAAGGCCCAGCGGCTCTTCGATGCAAACAGAGCTGAACTCTTCACCCAGAGCTGTGCAGATCTGGACAAATGGCTGCACGGCCTGGAGAGTCAGATTCAATCTGACGACTATGGCAAAGACCTCACCAGTATGCTGGAGAATCAGATGGAGGTGCGGAAGAAGGAGATCGAAGAGCTCCAGAGCCAGGCGCAGGCCCTGAGCCAGGAGGGGAAGAGCACGGACGAGGTGGACAGCAGGCGCCTCACCGTGCAGACCAAGTTCACGGAGCTGCTGGAGCCCCTGAGCGAGAGGAAGCAGAACCTGCTGGCCTCCAAAGAGATCCATCAGTTCAACAGGGACGTGGAGGACGAGATCTTGTGGGTCGGAGAGAGGATGCCTTTGGCAACTTCCACGGATCACGGCCACAACCTCCAGACCGTGCAGCTGTTAATAAAGAAAAATCAGACCCTGCAGAAGGAGATCCAGGGGCACCAGCCCCGCATCGACGACATCTTTGAGAGGAGCCAGAGCATCGTCACGGACAGCACCCTCAACGCCGAGGCCATCCGGCAGAGGCTGGCCGACCTGAAGCAGCTGTGGGGCCTCCTCATCGAGGAGACRGAGAAGCGGCACCGGCGGCTGGAGGAGGCGCACAAGGCCCAGCAGTACTACTTCGACGCGGCCGAGGCCGAGGCGTGGATGAGCGAGCAGGAGCTGTACATGATGTCCGAGGAGAAGGCCAAGGATGAGCAGAGTGCCGTCTCCATGTTGAAGAAGCACCAGATTCTAGAACAAGCCGTGGAGGACTACGCGGAGACGGTGCATCAGCTCTCCAAGACCAGCCGGGCCCTGGTGGCTGACAGCCATCCTGAAAGTGAGCGCATCAGCATGCGGCAGTCCAAGGTGGACAAGCTGTATGCGGGCCTCAAGGACCTGGCGGAGGAGAGGAGGGGCAAGCTGGACGAGAGGCACCGGCTGTTCCAGCTCAACCGGGAGGTGGACGACCTGGAGCAGTGGATCGCCGAGAGGGAGATGCTACAAGAGCGATTCCGGGAATTCGCCCGGGACACAGGGAACATTGGGCAGGAGCGCGTGGACACGGTCAATCACATGGCAGACGAACTCATCAACTCTGGACACTCGGATGCCGCCACCATCGCCGAGTGGAAGGACGGGCTCAACGAAGCCTGGGCTGACCTCCTGGAGCTCATCGACACGAGGACACAGATCCTCGCCGCCTCCTATGAACTGCACAAGTTTTACCACGATGCCAAGGAGATCTTTGGGCGCATCCAGGACAAGCACAAGAAACTCCCCGAGGAGCTCGGGAGAGATCAGAACACAGTGGAGACCTTACAGAGAATGCACACCACGTTCGAGCACGACATCCAGGCTCTGGGCACTCAGGTGAGACAGCTGCAGGAGGATGCAGCCCGCCTCCAGGCCGCCTATGCAGGCGACAAGGCCGAGGACATCCAGAAGCGGGAGAACGAGGTCCTGGAAGCCTGGAAGGCCCTGCTGGACGCCTGCGAGGGCCGCAGGGTGCGGCTGGTGGACACGGGGGACAAGTTCCGCTTCTTCAGCATGGTGCGCGACCTCATGCTGTGGATGGAGGATGTCATCCGGCAGATCGAAGCCCAGGAGAAGCCACGGGATGTGTCCTCTGTTGAACTATTAATGAATAATCATCAGGGTATCAAAGCTGAAATCGATGCTCGTAATGACAGTTTCACGACCTGCATTGAACTTGGGAAATCGCTGCTGGCGAGGAAGCACTACGCATCAGAGGAGATCAAGGAGAAGTTACTGCAGTTGACGGAAAAGAGGAAAGAAATGATTGACAAGTGGGAAGACCGATGGGAATGGTTAAGACTGATCTTGGAGGTCCATCAGTTCTCAAGGGACGCCAGTGTGGCCGAGGCCTGGCTGCTCGGACAGGAGCCCTACCTCTCCAGCCGAGAAATAGGCCAGAGCGTGGACGAGGTGGAGAAGCTCATCAAGCGCCACGAGGCTTTTGAAAAGTCTGCAGCGACCTGGGACGAGAGGTTCTCCGCCCTGGAAAGGCTGACGACATTGGAGCTACTGGAAGTGCGCAGACAGCAAGAGGAAGAGGAGAGGAAGAGGCGGCCGCCTTCTCCTGAGCCGAGCTCGAAGGTTTCCGAGGAGACCGAGTCCCAGCAGCAGTGGGATGCTTCAAAAGGAGAGCAAGTTTCCCAGAATGGTTTGCCGGCTGAACAGGGATCTCCACGGGTTAGTTACCGCTCTCAAACCTACCAAAACTACAAAAACTTTAATAGCAGACGGACAGCCAGTGACCAGCCGTGGTCTGGACTGTGA

Related Sequences

bmy_19123T0 Protein

Length: 2076 aa      View alignments
>bmy_19123T0
MCFHLNLESKSHPFTQPPSIILTKPALENSADWPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQAVVAVARELEAENYHDIKRIAARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYIMDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIGIQAERVRGVNASAQKFATDGEGYKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKILSSDDYGKDLTSVVRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERIAYIHEQWAHLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSSDVGHDEYSTQSLVKKHKDVAEEIANYRPTIDSLHEQAGALPQEHAESPDVQGRLAGIEERYKEVAELTRLRKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNYHLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAEKLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSRTQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTTLEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNISSDRIQEKVDSIDDRHRKNREAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDANRAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSMLENQMEVRKKEIEELQSQAQALSQEGKSTDEVDSRRLTVQTKFTELLEPLSERKQNLLASKEIHQFNRDVEDEILWVGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQSIVTDSTLNAEAIRQRLADLKQLWGLLIEETEKRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLYAGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREMLQERFREFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDKAEDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRPPSPEPSSKVSEETESQQQWDASKGEQVSQNGLPAEQGSPRVSYRSQTYQNYKNFNSRRTASDQPWSGL*