Sequence details bmy_19129 (Coding sequence)

Part of scaffold_1987 (Scaffold)

For more information consult the page for scaffold_1987 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000004689 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004419, Bottlenosed dolphin)

Protein Percentage 98.55%
cDNA percentage 97.9%
Ka/Ks Ratio 0.18352 (Ka = 0.0106, Ks = 0.0578)

Additional orthologs identified in other species via the OPTIC pipeline.

PABPC1 (Cow)   Pabpc1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1911 bp    Location:291840..272817   Strand:-
Raw sequence 
>bmy_19129
ATGAACCCCAGCGCCCCCAGCTACCCCATGGCCTCGCTCTACGTGGGGGACCTACACCCCGACGTGACCGAGGCGATGCTCTATGAGAAGTTCAGCCCGGCCGGGCCCATCCTCTCCATCCGGGTCTGCAGGGACATGATCACCCGCCGCTCTTTGGGCTACGCGTATGTGAACTTCCAGCAGCCGGCAGACGCGGAGCGTGCTTTGGACACCATGAATTTTGATGTTATAAAGGGCAAGCCAGTACGCATTATGTGGTCTCAGCGTGATCCATCACTTCGCAAAAGTGGAGTGGGCAACATATTCATTAAAAATTTGGACAAATCCATTGATAATAAAGCACTGTATGATACATTTTCTGCTTTTGGTAACATCCTTTCATGTAAGGTGGTTTGTGATGAAAATGGTTCCAAGGGTTATGGATTTGTGCATTTTGAGACACAAGAAGCAGCTGAAAGAGCTATTGAAAAAATGAATGGGATGCTTCTAAATGATCGCAAAGTATTTGTTGGACGATTTAAGTCTCGTAAGGAACGAGAAGCAGAACTCGGAGCGAGGGCAAAAGAGTTCACCAATGTTTACATCAAGAACTTTGGAGAAGACATGGATGATGAGCGCCTGAAGGATCTCTTTGGCAAGTTCGGACCTGCCTTAAGTGTGAAAGTAATGACCGATGAGAGTGGAAAATCCAAAGGTTTTGGATTTGTAAGCTTTGAAAGGCATGAAGATGCACAGAAAGCTGTGGATGAGATGAACGGAAAGGAGCTCAATGGAAAACAAATTTACGTTGGTCGAGCCCAGAAAAAAGTGGAACGGCAGACGGAACTTAAGCGCAAATTTGAACAGATGAAGCAAGATAGGATCACCAGATACCAGGGTGTTAACCTTTATGTGAAAAATCTTGATGATGGTATTGATGATGAACGTCTCCGGAAAGAGTTTTCTCCGTTTGGTACAATCACTAGTGCAAAGGTTATGATGGAGGGTGGTCGCAGCAAAGGGTTTGGATTTGTGTGTTTCTCCTCCCCAGAAGAAGCCACTAAAGCAGTTACAGAAATGAATGGTAGAATTGTGGCCACCAAGCCATTGTATGTAGCTTTAGCTCAGCGCAAAGAAGAGCGCCAGGCTCACCTCACTAACCAGTATATGCAGAGAATGGCAAGTGTAAGAGCTGTGCCCAACCCTGTAATCAACCCCTACCAGCCAGCACCTCCTTCAGGTTACTTCATGGCAGCTATCCCACAGACTCAGAACCGTGCTGCATACTATCCTCCTAGCCAAATTGCTCAACTAAGACCAAGTCCTCGCTGGACTGCTCAGGGTGCCAGACCTCATCCATTCCAAAATATGCCCGGTGCTATCCGCCCAGCCGCTCCTAGACCACCATTTAGTACCATGAGACCAGCTTCTTCACAGGTTCCACGAGTCATGTCAACACAGCGTGTTGCTAACACATCAACACAGACAATGGGTCCACGTCCCGCAGCTGCTGCAGCTGCAGCTACTCCTGCTGTTCGCACCGTTCCACAGTATAAATACGCTGCGGGAGTTCGCAATCCTCAACAACATCTTAACGCACAGCCACAAGTTACCATGCAGCAGCCTGCTGTTCATGTACAAGGTCAGGAGCCTTTGACTGCTTCCATGTTGGCATCTGCCCCTCCTCAAGAACAGAAGCAAATGTTGGGTGAACGGCTGTTTCCTCTAATTCAAGCCATGCACCCTACTCTTGCTGGTAAAATCACTGGCATGTTGTTGGAGATTGATAATTCAGAACTTCTTCATATGCTTGAGTCTCCAGAGTCTCTCCGTTCTAAAGTTGATGAAGCTGTAGCTGTACTACAAGCCCACCAAGCAAAAGAGGCTGCCCAGAAAGCAGTTAACAGTGCCACTGGGGTTCCAACTGTTTAA

Related Sequences

bmy_19129T0 Protein

Length: 637 aa      
>bmy_19129T0
MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPFSTMRPASSQVPRVMSTQRVANTSTQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATGVPTV*