Part of scaffold_1953 (Scaffold)

For more information consult the page for scaffold_1953 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PDCL ENSTTRG00000016953 (Bottlenosed dolphin)

Gene Details

phosducin-like

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016070, Bottlenosed dolphin)

Protein Percentage 76.0%
cDNA percentage 75.67%
Ka/Ks Ratio 0.07801 (Ka = 0.0076, Ks = 0.0972)

PDCL ENSBTAG00000030675 (Cow)

Gene Details

Phosducin-like protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000040945, Cow)

Protein Percentage 95.02%
cDNA percentage 93.02%
Ka/Ks Ratio 0.06038 (Ka = 0.0213, Ks = 0.352)

PDCL  (Minke Whale)

Gene Details

phosducin-like

External Links

Gene match (Identifier: BACU016313, Minke Whale)

Protein Percentage 99.34%
cDNA percentage 98.89%
Ka/Ks Ratio 0.08182 (Ka = 0.0029, Ks = 0.0356)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1011 bp    Location:46476..35478   Strand:-
>bmy_19135
ATGGAATACCGGTGGGAGGTGGTGGAATACGGGTGGTCGGCGAGCCTGGATGAGACGGTCTTGTCGCCAGCAAAGAGCCTGTTATGTCGCCCTCTCCCAGGCACCATGACGACCCTGGATGATAAGTTGCTGGGGGAGAAGCTGCAGTACTACTACAGCAGCAGCGAGGATGAGGAAAGTGACCACGAGGACAAGGACAGAAGCAGGGGTGCCCTGGCCGGCAGTTCCATGCCTGCAGATGCTGAGTTGGCAGGCGAAGGCATCTCAGTTAACACAGGTCCAAAAGGCGTGATCAACGACTGGCGCCGCTTCAAACAGCTGGAGACTGAGCAGCGGGAGGAGCAGTGCCGGGAGATGGAGAGGCTGATCAAGAAGCTGTCCGTGAGCTGCAGGTCCCATCTGGACGAAGAGGAGGAGCAGTGGAAGCAGAAGGGCCTCCAGGAGAAGATCAGTGGGAAGATGACTCTGAAGGACTTTGCCATGATGAATGAGGACCAAGACGACGAGGAGTTCCTGCAGCAGTACCGGAAGCAGAGGATGGAAGAGATGCGGCAGCAGCTCCACCAGGGGCCCCAGTTCAAGCAGGTTTTTGAAATCCCCAGTGGAGAAGGGTTTCTGGACATGATTGACAAGGAGCAGAAGAGCACCCTCATCATGGTCCATATTTACGAGGACGGCATCCCGGGGACCGAAGCCATGAACGGTTGCATGATCTGCCTGGCCTCGGAGTACCCAGCCGTCAAGTTCTGCCGGGTGAAGAGCTCGGTGATCGGGGCCAGCAGTCGCTTCACCAGGAACGCCCTTCCCGCCCTGCTCATCTACAAGGGGGGCGAGCTGATAGGCAATTTTGTCCGCGTCACTGACCAGCTGGGGGAAGATTTCTTTGCGGTGGACCTTGAAGCTTTCCTCCAGGAGTTTGGATTGCTCCCAGAAAAGGAAGTCTTGTTGCTAACCTCYGTGCGTAACTCGGCCACCTGCCACAGCGAGGATAGCGATTTGGAAATAGATTGA

Related Sequences

bmy_19135T0 Protein

Length: 337 aa      View alignments
>bmy_19135T0
MEYRWEVVEYGWSASLDETVLSPAKSLLCRPLPGTMTTLDDKLLGEKLQYYYSSSEDEESDHEDKDRSRGALAGSSMPADAELAGEGISVNTGPKGVINDWRRFKQLETEQREEQCREMERLIKKLSVSCRSHLDEEEEQWKQKGLQEKISGKMTLKDFAMMNEDQDDEEFLQQYRKQRMEEMRQQLHQGPQFKQVFEIPSGEGFLDMIDKEQKSTLIMVHIYEDGIPGTEAMNGCMICLASEYPAVKFCRVKSSVIGASSRFTRNALPALLIYKGGELIGNFVRVTDQLGEDFFAVDLEAFLQEFGLLPEKEVLLLTSVRNSATCHSEDSDLEID*