Sequence details bmy_19136 (Coding sequence)

Part of scaffold_1953 (Scaffold)

For more information consult the page for scaffold_1953 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RC3H2 ENSTTRG00000016954 (Bottlenosed dolphin)

Gene Details

ring finger and CCCH-type domains 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016072, Bottlenosed dolphin)

Protein Percentage 94.52%
cDNA percentage 94.43%
Ka/Ks Ratio 0.12455 (Ka = 0.0021, Ks = 0.0165)

BT.43222 ENSBTAG00000023867 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000032718, Cow)

Protein Percentage 98.69%
cDNA percentage 96.92%
Ka/Ks Ratio 0.05653 (Ka = 0.0061, Ks = 0.1074)

RC3H2  (Minke Whale)

Gene Details

ring finger and CCCH-type domains 2

External Links

Gene match (Identifier: BACU016312, Minke Whale)

Protein Percentage 99.91%
cDNA percentage 99.74%
Ka/Ks Ratio 0.04933 (Ka = 0.0004, Ks = 0.0083)

Additional orthologs identified in other species via the OPTIC pipeline.

RC3H2 (Human)   Rc3h2 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3450 bp    Location:107512..61342   Strand:-
Raw sequence 
>bmy_19136
ATGCCTGTGCAGGCAGCTCAATGGACAGAATTTCTGTCCTGTCCAATCTGCTATAATGAATTTGATGAGAATGTGCACAAACCCATCAGTTTAGGTTGTTCACACACTGTTTGCAAGACCTGCTTGAATAAACTTCACCGAAAAGCTTGTCCTTTTGATCAGACTGCCATCAACACAGACATTGATGTGCTTCCTGTCAACTTCGCACTTCTCCAGTTAGTTGGAGCCCAGGTACCAGATCATCAATCAGTAAAGTTAAGTAATTTAGGTGAGAACAAACACTATGAGGTTGCAAAGAAATGTGTTGAGGATTTGGCACTCTACTTAAAACCACTAAGTGGAGGTAAAGGTGTAGCTAGTTTGAACCAGAGTGCACTGAGCCGTCCAATGCAAAGGAAACTGGTGACACTTGTAAACTGTCAACTGGTGGAGGAAGAAGGTCGTGTAAGAGCCATACGAGCAGCCCGTTCACTTGGAGAAAGAACTGTAACGGAACTAATATTACAGCACCAGAACCCTCAGCAATTGTCTGCCAACTTATGGGCTGCTGTCAGGGCTCGAGGATGCCAGTTTCTAGGGCCAGCTATGCAAGAAGAGGCCTTGAAGCTGGTGTTGCTGGCATTAGAAGATGGTTCTGCTCTCTCAAGGAAAGTTCTGGTACTTTTTGTTGTGCAAAGACTAGAACCAAGATTTCCTCAGGCATCAAAAACAAGTATTGGTCATGTTGTGCAACTACTGTATCGAGCTTCTTGTTTTAAGGTTACCAAAAGGGATGAAGACTCTTCCCTGATGCAGCTAAAGGAGGAATTTCGGAGTTATGAGGCTTTACGCAGAGAACATGATGCCCAAATTGTTCATATTGCTATGGAAGCAGGACTCCGTATTTCACCTGAGCAGTGGTCTTCACTTCTATATGGTGACTTGGCGCATAAATCACACATGCAGTCTATCATTGATAAGCTGCAGTCTCCAGAATCATTTGCAAAGAGTGTTCAGGAATTGACAATTGTTTTGCAACGAACAGGTGACCCAGCTAACTTAAATAGGCTGAGGCCTCATTTAGAGCTTCTTGCAAACATAGACCCTAATCCAGATGCTGTTTCACCAACTTGGGAGCAGCTAGAAAATGCAATGGTAGCTGTTAAAACAGTGGTTCATGGCCTTGTGGACTTCATACAAAATTATAGTAGAAAAGGCCATGAGACACCTCAGCCTCAGCCAAACAGCAAATATAAGACTAGCATGTGCCGAGATTTGCGACAGCAAGGAGGGTGTCCACGAGGAACAAATTGTACTTTTGCCCATTCTCAGGAAGAGCTTGAAAAGTATCGATTAAGGAACAAAAAGATCAATGCAACTGTAAGAACGTTTCCTCTTCTAAATAAAGTTGGTGTAAACAACACTGTCACAACCACAGCCGGAAATGTCATTTCTGTCATAGGAAGTACTGAAACAACGGGGAAAATTGTTCCAAGTACAAACGGAATTTCAAATGCAGAAAACAGTGTTTCCCAGCTAATTCCACGTAGTGCTGACAGTACATTAAGAGCTCTGGAGACTGTGAAGAAAGTGGGGAAGGTTGGCACTAATGGTCAGAATGCTGCTGGGCCTTCTGCAGAGTCTGTAACTGAAAATAAAATTGGTTCTCCACCCAAGACTCCTGTAAGTAATATAGCGGCTACCTCAGCTGGGCCCACTAATGTTGGAACAGAGCTGAATTCTGTGCCTCCAAAATCCAGCCCATTTATAACTAGAGTACCAGTATATCCTCAGCATTCTGAAAACATTCAGTATTTTCAAGATCCAAGGACTCAGATACCCTTCGAAGTCCCACAGTACCCACAGACAGGATACTACCCACCACCTCCAACAGTACCAGCTGGTGTGGCTCCCTGTGTTCCTCGCTTTGTGAGGTCCAATAATGTTCCAGAGTCCTCCCTCCCACCGGCTTCCATGCCATATGCTGATCATTACAGTACATTTTCGCCTCGAGATCGAATGAATTCTTCTCCTTACCAACCTCCTCCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCTTCTGGAATGTATGCTCCTGTGTATGACAGCAGGCGCATCTGGCGCCCACCTATGTACCAACGAGATGACATTATTAGAAGCAATTCTTTACCTCCAATGGATGAACCTTGTGGTCATTTGAAGACCAGTTGCGAGGAGCAGATAAGAAGAAAGCCAGAGCAGTGGGCACAGTACCACACTCAGAAAGCACCTCTTGTCTCTTCAACTCTTCCTGTGGCAACACAGTCACCAACGCCACCTTCTCCTCTATTCAGTGTAGACTTTCGCACTGATTTCTCTGAAAGTGTGAGTGGCACAAAATTTGAAGAAGATCATCTTTCCCATTATTCCCCCTGGTCTTGTGGCACCATAGGTTCCTGTATAAATGCTATCGATTCAGAGCCCAGAGATGTAATTGCTAATTCAAATGCTGTGTTAATGGACCTGGACAGTGGAGATGTTAAGAGAAGAGTGCATTTATTTGAAACTCAGAGAAGGACAAAAGAAGAAGATCCAATAATTCCTTTTAGTGATGGACCTATCATCTCAAAATGGGGTGCAATTTCTAGATCTTCCCGTACAGGTTACCATACCACGGATCCTGTCCAGGCCACTGCTTCCCAAGGAAGTGCGACTAAGCCTATCAGCGTATCAGATTATGTCCCTTATGTCAATGCTGTTGATTCAAGATGGAGTTCATATGGTAATGAAGCTACATCATCAGCACATTATATTGAACGGGACAGATTCATTGTTACCGATTTATCTGGTCATAGAAAGCATTCCAGTACTGGAGACCTTTTGAGCATTGAACTTCAGCAGGCCAAGAGTAACTCGTTGCTTCTTCAGAGGGAGGCCAATGCTCTGGCCATGCAACAGAAGTGGAATTCCCTGGACGAAGGCCGTCACCTTACCTTAAATCTTCTAAGCAAGGAAATTGAACTGAGAAATGGAGAGAGTGATTATACAGAAGATGCAGCCGATACTAAGCCTGATAGGGATATAGAGTTAGAGCTTTCAGCACTTGATACTGATGAACCTGATGGACAAGGTGAACAGATTGAAGAGATCCTGGACATACAGCTTGGTATCAGTTCTCAAAATGATCAGTTACTGAATGGAACAGCAGTAGAAAATGGGCATCCAGTCCAACAACACCAAAAGGAGCCCCTGGAGCAGAAGAGACAGAGTTTAGGTGAAGACCATGTGATTCTGGAGGAGCAAAAAACAATTCTGCCGGTAACTTCTTGCTTTAGTCAGCCACTCCCAGTGTCCATTAGCAATGCGAGTTGCCTCCCTCTTGCCACATCTGTCAGTGTTGGCAACCTCATTCTGAAAACTCATGTTATGTCTGAAGATAAAAACGACTTTTTGAAACCTGTTGCAAATGGGAAGATGGTTAACAGCTGA

Related Sequences

bmy_19136T0 Protein

Length: 1150 aa      View alignments
>bmy_19136T0
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTDIDVLPVNFALLQLVGAQVPDHQSVKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVASLNQSALSRPMQRKLVTLVNCQLVEEEGRVRAIRAARSLGERTVTELILQHQNPQQLSANLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQWSSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANIDPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLRQQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVIGSTETTGKIVPSTNGISNAENSVSQLIPRSADSTLRALETVKKVGKVGTNGQNAAGPSAESVTENKIGSPPKTPVSNIAATSAGPTNVGTELNSVPPKSSPFITRVPVYPQHSENIQYFQDPRTQIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASMPYADHYSTFSPRDRMNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPMDEPCGHLKTSCEEQIRRKPEQWAQYHTQKAPLVSSTLPVATQSPTPPSPLFSVDFRTDFSESVSGTKFEEDHLSHYSPWSCGTIGSCINAIDSEPRDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGPIISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYGNEATSSAHYIERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDEGRHLTLNLLSKEIELRNGESDYTEDAADTKPDRDIELELSALDTDEPDGQGEQIEEILDIQLGISSQNDQLLNGTAVENGHPVQQHQKEPLEQKRQSLGEDHVILEEQKTILPVTSCFSQPLPVSISNASCLPLATSVSVGNLILKTHVMSEDKNDFLKPVANGKMVNS*