Part of scaffold_2001 (Scaffold)

For more information consult the page for scaffold_2001 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ALX1 ENSTTRG00000014650 (Bottlenosed dolphin)

Gene Details

ALX homeobox 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013888, Bottlenosed dolphin)

Protein Percentage 96.93%
cDNA percentage 97.22%
Ka/Ks Ratio 0.26386 (Ka = 0.0185, Ks = 0.07)

BT.87394 ENSBTAG00000014977 (Cow)

Gene Details

ALX homeobox protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019938, Cow)

Protein Percentage 95.18%
cDNA percentage 95.32%
Ka/Ks Ratio 0.20877 (Ka = 0.0267, Ks = 0.128)

ALX1  (Minke Whale)

Gene Details

ALX homeobox 1

External Links

Gene match (Identifier: BACU020229, Minke Whale)

Protein Percentage 96.94%
cDNA percentage 97.82%
Ka/Ks Ratio 0.47265 (Ka = 0.0187, Ks = 0.0396)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 690 bp    Location:151692..167683   Strand:+
>bmy_19145
ATGGAGTTTCTGAGCGAGAAGTTTGCCCTCAAGAGCCCACCGAGTAAAAACAGTAACTTTTACATGGGCGCAGGAGGCGCGTTGGAGCACGTTATGGAGACGCTGGACAATGAGTCCTTTTACAGCAAAGCGTCGGCGGCCAAATGCGTGCAGGCCTTCGGGCCCCTGCCCCGCGCCGAGCATCACGTGCGCCTGGAGAGGACCTCGCCCTGTCAGGACGGCAGCGTGAACTATGGGATCACTAAAGTAGAAGGACAGCAGCCTCTTCACACCGAACTAAATAGAGCTATGGACAACTGTAACAGTCTCCGGATGTCTCCCGTGAAAGGGATGCCAGAGAAGGGAGAACTGGATGAACTTGGGGATAAATGTGACAGCAACGTATCCAGCAGTAAGAAACGGAGACACCGAACCACCTTTACCAGCTTGCAGCTGGAGGAGCTGGAAAAGGTCTTTCAGAAAACCCATTACCCGGATGTATACGTCAGAGAACAGCTTGCTCTGAGGACTGAGCTGACTGAGGCCAGGGTCCAGGTTTGGTTTCAAAATCGAAGGGCCAAGTGGAGAAAAAGAGAACGTTATGGCCAAATCCAGCAAGCTAAAAGCCATTTTGCTGCCACCTATGACATATCAGTTTTGCCAAGGACTGACAGCTATCCACAGTTTTTACCTTTAGAAAAACACACATGA

Related Sequences

bmy_19145T0 Protein

Length: 230 aa      View alignments
>bmy_19145T0
MEFLSEKFALKSPPSKNSNFYMGAGGALEHVMETLDNESFYSKASAAKCVQAFGPLPRAEHHVRLERTSPCQDGSVNYGITKVEGQQPLHTELNRAMDNCNSLRMSPVKGMPEKGELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKWRKRERYGQIQQAKSHFAATYDISVLPRTDSYPQFLPLEKHT*