Sequence detailsbmy_19150 (Coding sequence)

Part of scaffold_2007 (SequenceType object (1))

For more information consult the page for scaffold_2007 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ATXN1LENSBTAG00000046255 (Cow)

Gene Details

ataxin-1-like

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000056291, Cow)

Protein Percentage 94.32%
cDNA percentage 93.79%
Ka/Ks Ratio 0.18492 (Ka = 0.0294, Ks = 0.159)

Additional orthologs identified in other species via the OPTIC pipeline.

ATXN1L (Human)   Atxn1l (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2067 bp    Location:253626..257093   Strand:+
Raw sequence 
>bmy_19150
ATGAAACCTGTTCATGAGAGGAGTCAGGAATGCCTTCCACCAAAGAAACGAGACCTCCCCGTGACCAGCGAGGATATGGGGAGAACTACCAGCTGCTCAACTAACCACACACCCTCCAGTGATGCCTCTGAATGGTCCCGAGGGGTGGTGGTGGCCGGGCAGAGCCAGGCAGGAGCCAGAGTCAGCCTGGGGGGTGATGGAGCTGAGGCCATCTCTGGTCTGACGGTGGACCAGTATGGCATGCTGTATAAGGTGGCTGTGCCACCTGCCACCTTCTCCCCAACTGGCCTCCCGTCTGTGGTGAACATGAGCCCCTTGCCCCCCACATTTAATGTAGCGTCTTCACTGATTCAACATCCAGGAATCCACTATCCCCCAATCCACTATGCTCAGCTCCCGTCCACCTCTCTGCAGTTTGTCGGGTCTCCTTATAGCCTTCCCTATGCTGTGCCACCTAATTTCCTACCGAGTCCCCTCCTTTCTCCTTCTGCCAACCTCGCCACCTCTCACCTTCCACACTTTGTGCCATATGCCTCACTCCTGGCAGAAGGAGCCACTCCTCCCCCCCAGGCTTCATCCCCGGCCCATTCATTCAACAAAGCCCCCTCTGCCACCTCCCCACCTGGGCAGTTGCCACATCACTCGAGTACTCAGCCACTGGACCTCGCTCCAGGCCGGATGCCCATTTATTATCAGATGTCCAGGCTACCTGCTGGGTACACCATGCATGAAACCCCTCCAGCAGGTGCCAGCCCAGTTCTTACCCCTCAGGAGGGCCAGTCTGCTCTGGAAGCAGCCGCTGCCAATGGACAGAGACAACGAGAGAGAAATTTAGTGAGACGGGAAAGCGAAGCCCTCGACTCCCCCAACAGCAAGGGTGAGGGCCAGGGACTGGTGCCAGTGGTAGAATGTGTGGTGGATGGACAGTTGTTTTCAGGTTCTCAGACTGCGCGGGTAGAGGTGGCAGTGCCAGCACACCGAGGGACCCCAGACACCGACCTCGAGGTCCAGCGGGTGGTTGGTGCTTTAGCTTCTCAGGACTATCGTGTGGTGGCAGCTCAGAGGAAGGGTGAGCCCAGCCCCCTCAACCTGTCCCATCATAACCCCGACCATCAGGGTGAGGGGCGAGGGTCAGCCAGGAACGCAGCAGAGATGGCCGAGAAAAATCAGGCCCGAGGGTTCTACCCTCAATCCCATCAGGAGCCCCTGAAACATAGACCTTTACCCAAAGCAATGGTTGTAGCCAATGGCAACCTGGTGCCCACTGGAACTGACCCAAGCCTGCTACCCATGGGCTCGGAGATCCTGGTGGCGTCAAGTTTGGACATGCAGGCCAGAGCCGCCTTCCCAGACAAGGAGTCAACGCCACCCCCCTTTACCTCTTCCCACTTGCCCTCCCATTTCATGAAAGGCGCCATCATCCAGCTGGCTACAGGGGAGCTGAAGCGGGTGGAGGACCTCCAGACCCAGGATTTTGTGCGCAGTGCCGAAGTGAGCGGGGGGCTGAAGATTGACTCTAGCACAGTCGTGGACATTCAGGAGAGCCAGTGGCCTGGATTTGTCATGCTGCATTTCGTGGTGGGTGAGCAGCAGAGCAAAGTGAGCATCGAGGTGCCCCCCGAGCACCCCTTCTTTGTATATGGCCAGGGTTGGTCCTCCTGCAGCCCTGGGCGGACTGCACAGCTCTTCTCTCTGCCCTGCCATCGGCTACAGGTGGGAGATGTCTGCATCTCTATCAGTTTACAGAGCTTGAACAGTCACTCAGTTTCTCAGTCCAGCTGTGCTCCCCCAGGCCAGCTGGTTCCTCCCCGAGAAAGGCCTGAGAGGACAGTTTTGGGACCCCGAGAGCAATGTGACAGTGATGGGAAAAGCCAGCCGTTAGGCGAGGGCTCCCGAATGGTAGAGCCCTTGCAGCCAGAGCCTGGTGCTCAGGCCTGCTGGCCAGCCCCGAGCTTCCAAAGATACGGCATGCAAGGGGAGGAGGCACGGGCTGCGCTGCTCCGTCCCTCTTTCATTCCACAGGAGGTAAAGCTGTCCATTGAAGGGCGTTCCAATGCAGGAAAATGA

Related Sequences

bmy_19150T0 SequenceType object (3)

Length: 689 aa      View alignments
>bmy_19150T0
MKPVHERSQECLPPKKRDLPVTSEDMGRTTSCSTNHTPSSDASEWSRGVVVAGQSQAGARVSLGGDGAEAISGLTVDQYGMLYKVAVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQHPGIHYPPIHYAQLPSTSLQFVGSPYSLPYAVPPNFLPSPLLSPSANLATSHLPHFVPYASLLAEGATPPPQASSPAHSFNKAPSATSPPGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAGYTMHETPPAGASPVLTPQEGQSALEAAAANGQRQRERNLVRRESEALDSPNSKGEGQGLVPVVECVVDGQLFSGSQTARVEVAVPAHRGTPDTDLEVQRVVGALASQDYRVVAAQRKGEPSPLNLSHHNPDHQGEGRGSARNAAEMAEKNQARGFYPQSHQEPLKHRPLPKAMVVANGNLVPTGTDPSLLPMGSEILVASSLDMQARAAFPDKESTPPPFTSSHLPSHFMKGAIIQLATGELKRVEDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWPGFVMLHFVVGEQQSKVSIEVPPEHPFFVYGQGWSSCSPGRTAQLFSLPCHRLQVGDVCISISLQSLNSHSVSQSSCAPPGQLVPPRERPERTVLGPREQCDSDGKSQPLGEGSRMVEPLQPEPGAQACWPAPSFQRYGMQGEEARAALLRPSFIPQEVKLSIEGRSNAGK*