Part of scaffold_2007 (Scaffold)

For more information consult the page for scaffold_2007 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000001900 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001782, Bottlenosed dolphin)

Protein Percentage 97.92%
cDNA percentage 98.27%
Ka/Ks Ratio 0.30014 (Ka = 0.0103, Ks = 0.0343)

BT.49487 ENSBTAG00000019883 (Cow)

Gene Details

IST1 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000032246, Cow)

Protein Percentage 96.19%
cDNA percentage 94.0%
Ka/Ks Ratio 0.09415 (Ka = 0.0183, Ks = 0.1939)

IST1  (Minke Whale)

Gene Details

increased sodium tolerance 1 homolog (yeast)

External Links

Gene match (Identifier: BACU018161, Minke Whale)

Protein Percentage 99.65%
cDNA percentage 99.42%
Ka/Ks Ratio 0.10456 (Ka = 0.0017, Ks = 0.0159)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 870 bp    Location:322276..348859   Strand:+
>bmy_19153
ATGCTGGGCTCTGGATTTAAAGCTGAGCGTTTACGAGTCAATTTGAGATTAGTCATAAACCGTCTTAAATTATTGGAGAAAAAAAAAACGGAACTGGCGCAGAAAGCAAGGAAAGAGATTGCTGACTATCTGGCTGCTGGGAAAGATGAACGAGCTCGAATCCGAGTGGAGCACATTATTCGAGAAGACTACCTTGTTGCTGATCAACTCTGTGCCAAGTATAGCAAGGAATATGGCAAGTTATGTAGGACCAACCAGATTGGAACTGTGAATGACCGGCTAATGCACAAACTGAGTGTGGAGGCCCCACCCAAAATCCTGGTGGAGAGATACCTGATTGAAATTGCCAAGAACTACAATGTGCCCTATGAGCCTGACTCTGTGGTCATGAAAGGGGGCCCTGGAAGAGGAGGTGGGGGCGGATTCACAGTACCAGCTGGTGGACCTGATGGAACAGTGCCAATGCCCATGCCCATGCCCATGCCATCTCCAAACACTCCTTTCTCATACCCTCTTCCAAAGGGACCATCGGATTTCAATGGATTGCCAATGGGAAATTATCAGGCCTTTCCCAATATTCATCCACCTCAGATACCAGCAACTCCCCCATCGTATGAATCTGTTGATGACATTAATGCTGATAAGAATGTCTCTTCTGCACAGATCGTTGGTCCTGGACCCAAGCCAGAAGCTTCTGCAAAGCCCCCTTCCAGACCCATGGATACCTATGACAATTTTGTACTGCCAGAATTGCCATCTGTGCCAGACACACTACCAACTGCATCTGCTGGTGCCAACACCTCAGCCTCTGAAGACATTGACTTTGATGATCTTTCCCGGAGATTTGAAGAGTTGAAAAAGAAAACATAG

Related Sequences

bmy_19153T0 Protein

Length: 290 aa      View alignments
>bmy_19153T0
MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMKGGPGRGGGGGFTVPAGGPDGTVPMPMPMPMPSPNTPFSYPLPKGPSDFNGLPMGNYQAFPNIHPPQIPATPPSYESVDDINADKNVSSAQIVGPGPKPEASAKPPSRPMDTYDNFVLPELPSVPDTLPTASAGANTSASEDIDFDDLSRRFEELKKKT*