Sequence details bmy_19161 (Coding sequence)

Part of scaffold_1990 (Scaffold)

For more information consult the page for scaffold_1990 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FGD1 ENSTTRG00000003275 (Bottlenosed dolphin)

Gene Details

FYVE, RhoGEF and PH domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003073, Bottlenosed dolphin)

Protein Percentage 85.15%
cDNA percentage 85.01%
Ka/Ks Ratio 0.12577 (Ka = 0.0016, Ks = 0.0128)

FGD1 ENSBTAG00000015860 (Cow)

Gene Details

FYVE, RhoGEF and PH domain-containing protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021084, Cow)

Protein Percentage 93.55%
cDNA percentage 92.39%
Ka/Ks Ratio 0.23305 (Ka = 0.0472, Ks = 0.2027)

Additional orthologs identified in other species via the OPTIC pipeline.

FGD1 (Human)   Fgd1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2748 bp    Location:307143..286395   Strand:-
Raw sequence 
>bmy_19161
ATGCCTGCTGACATACAAGAAATCAATGTACTAATCACAAAGAACTCTTGTCTGTTACTGAAAACAGCCAGCCACAACCCTGGGCCTGGCTCCCCGTCTGACGGCTGGGGTGAAGGCTTCCCAGAAAGGCAGTGTGGCCAGGAAAGGGGCTCAGGAAAACCCGATACCACAGGGCTGCACCAGGGAAACCGTATCCTGGTTAAAAGTTTGTCCCTTGACCCTGGCCAGAGCCTTGAGCCTCATCCAGAAGGTCCCCAGCGACTTCGCTCAGACCCAGGTCCCCCCACTGAAACCCCCAGCCAGCGTCCTTCACCACTGAAGCGGGCACCGGGCCCAAAGCCACAGGTCCCCCCAAAGCCCAGCTACCTGCAGATGCCCCGGATGCCCCCACCACCTGAGCCCATCCCACCCCCGCCATCACGCCCACTGCCTGCAGACCCCCGAGTAGCCAAGGGCCTGGCCTCCAGGGCAGAGGCCAGCCTCAGTTCTGCAGCAGTATCCTCACTGATTGAGAAATTTGAAAGAGAGCCTGTGATTGTCGCCTCGGATAGGCCAGCCCCTGGCCCCAGCCCAGGTCCCGCAGAGCCAGCCATGTTGCCACAGCCACCCCTGCAGCCACCAGTGCCCCAGCTCCCCGAGGGCGAGGCCTCCCGCTGCCTGTTCCTGCTGGCTCCCGGGCCCCGGGACGGCGAGAAGGTGCCCAATCGGGACAGCGGTATTGACAGCATCAGCTCACCATCCAACAGCGAGGAGACCTGCTTCATCAGTGATGATGGGCCCCCCAGCCACAGCCTCTGCCCCGGGCTCCCTGCCCTGGCCAGTGTCCCTGTTGCTTTGGCCGACCCCCACCGACCCAGCTCCCAGGAGGTTGATAGTGACCTGGAGGAGGAGGATGACGAGGAGGAGGATGAGAAGGACAGAGAAATCCCAGTGCCCCCGATGGAGAGACAAGAGTCTGTGGAGTTGACTGTGCAGCAGAAGGTGTTCCACATTGCCAATGAGCTCCTACAAACCGAGAAAGCCTATGTTTCCAGGCTCCACCTCCTGGATCAGGTGTTCTGCGCCCGGCTGCTGGAAGAAGCTCGGAACCGCAGTTCCTTCCCGGCTGACGTCGTCCATGGCATCTTCTCTAACATCTGCTCCATCTATTGCTTCCACCAGCAGTTCCTGCTGCCTGAGCTAGAGAAGCGCATGGAGGAATGGGACCGCTACCCACGCATTGGAGACATCCTGCAGAAGCTGGCACCCTTCCTCAAGATGTACGGCGAGTATGTGAAGAACTTTGACCGGGCCGTGGAGCTGGTCAACACCTGGACAGAGCGCTCTACCCAGTTTAAAGTGATCATCCATGAGGTGCAGAAGGAGGAAGCCTGTGGCAACCTGACCTTGCAGCACCACATGCTGGAGCCCGTGCAGCGCATCCCCCGTTATGAGCTGCTTCTCAAGGACTATCTGTTAAAGCTGCCCCATGGCTCCCCGGACAGCAAGGATGCCCAAAAGTCTCTGGAGCTGATAGCCACAGCAGCAGAGCACTCTAATGCTGCCATCCGCAAAATGGAGCGAATGCACAAGCTGCTGAAGGTATATGAGCTGCTAGGGGGTGAGGAAGACATTGTCAGCCCCACTAAAGAGCTCATAAAAGAAGGCCACATCCTTAAGCTGTCAGCAAAGAACGGGACCACTCAAGACCGATACCTCATACTATTCAACGACCGCCTCCTTTACTGTGTGCCCAGGCTGCGGCTCCTTGGCCAGAAGTTTAGCGTGCGGGCACGCATCGATGTAGATGGCATGGAGCTAAAGGAAAGCTCCAACCTCAATCTGCCTCGGACCTTCCTGGTGTCAGGAAAGCAGCGCTCCCTGGAGCTCCAGGCCAGGACTGAGGAGGAGAAGAAAGACTGGGTCCAGGCCATCAACTCTACCCTCCTGAAGCATGAACAGACGCTGGAGACCTTCAAACTGTTGAACTCCACAAACAGGGAAGATGAAGACACACCCCCCAACTCTCCGAATGTGGATCTTGGGAAGCGGGCACCTACGCCCATCCGGGAAAAGGAAGTCACCATGTGCATGCGCTGCCAGGAGCCCTTCAATTCCATCACCAAACGCAGGCACCACTGCAAGGCCTGCGGGCATGTGGTTTGTGGGAAGTGCTCCGAGTTCCGGGCCCGCCTTGTCTATGACAACAACCGCTCCAACCGTGTGTGCACTGACTGCTACGTGGCCTTGCATGGGGTGCCCGGGAGCAGCCCAGCCTGCAGCCAGCATACACCCCAGCGCCGGAGGTCCATCCTGGAGAAACAGGCCTCAGTGGCTGCGGAGAACAGCGTCATCTGCAGCTTCCTGCACTACATGGAGAAGGGCGGGAAAGGCTGGCACAAGGCATGGTTTGTGGTCCCTGAGAACGAACCCTTGGTGCTGTACATCTACGGAGCCCCTCAGGATGTGAAAGCCCAGCGCAGCCTGCCCCTCATTGGCTTTGAGGTGGGGCCTCCTGAGGCTGGGGAACGGCCTGACAGACGGCATGTCTTCAAGATCACCCAGAGCCACCTGAGCTGGTACTTCAGCCCTGAGACAGAGGAGCTGCAGCGGCGCTGGATGGCTGTGCTCGGCCGGGCAGGCCGTGGGGACACGTTCTGCCCAGGGCCCACACTGTCTGAGGACAGAGAGATGGAGGAGGCACCAGTGGCAGCTTCAGGAGCCACGGCGGAACCCTCCGAAGCCCCCCAGACCCGAGACAAGACCTAG

Related Sequences

bmy_19161T0 Protein

Length: 916 aa      View alignments
>bmy_19161T0
MPADIQEINVLITKNSCLLLKTASHNPGPGSPSDGWGEGFPERQCGQERGSGKPDTTGLHQGNRILVKSLSLDPGQSLEPHPEGPQRLRSDPGPPTETPSQRPSPLKRAPGPKPQVPPKPSYLQMPRMPPPPEPIPPPPSRPLPADPRVAKGLASRAEASLSSAAVSSLIEKFEREPVIVASDRPAPGPSPGPAEPAMLPQPPLQPPVPQLPEGEASRCLFLLAPGPRDGEKVPNRDSGIDSISSPSNSEETCFISDDGPPSHSLCPGLPALASVPVALADPHRPSSQEVDSDLEEEDDEEEDEKDREIPVPPMERQESVELTVQQKVFHIANELLQTEKAYVSRLHLLDQVFCARLLEEARNRSSFPADVVHGIFSNICSIYCFHQQFLLPELEKRMEEWDRYPRIGDILQKLAPFLKMYGEYVKNFDRAVELVNTWTERSTQFKVIIHEVQKEEACGNLTLQHHMLEPVQRIPRYELLLKDYLLKLPHGSPDSKDAQKSLELIATAAEHSNAAIRKMERMHKLLKVYELLGGEEDIVSPTKELIKEGHILKLSAKNGTTQDRYLILFNDRLLYCVPRLRLLGQKFSVRARIDVDGMELKESSNLNLPRTFLVSGKQRSLELQARTEEEKKDWVQAINSTLLKHEQTLETFKLLNSTNREDEDTPPNSPNVDLGKRAPTPIREKEVTMCMRCQEPFNSITKRRHHCKACGHVVCGKCSEFRARLVYDNNRSNRVCTDCYVALHGVPGSSPACSQHTPQRRRSILEKQASVAAENSVICSFLHYMEKGGKGWHKAWFVVPENEPLVLYIYGAPQDVKAQRSLPLIGFEVGPPEAGERPDRRHVFKITQSHLSWYFSPETEELQRRWMAVLGRAGRGDTFCPGPTLSEDREMEEAPVAASGATAEPSEAPQTRDKT*