Sequence detailsbmy_19170 (Coding sequence)

Part of scaffold_1972 (SequenceType object (1))

For more information consult the page for scaffold_1972 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CDAENSTTRG00000011277 (Bottlenosed dolphin)

Gene Details

cytidine deaminase

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010692, Bottlenosed dolphin)

Protein Percentage 87.61%
cDNA percentage 89.09%
Ka/Ks Ratio 0.25974 (Ka = 0.0776, Ks = 0.2989)

CDAENSBTAG00000006136 (Cow)

Gene Details

cytidine deaminase

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000008074, Cow)

Protein Percentage 84.07%
cDNA percentage 83.48%
Ka/Ks Ratio 0.17256 (Ka = 0.1028, Ks = 0.5958)

Additional orthologs identified in other species via the OPTIC pipeline.

CDA (Human)   Cda (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 342 bp    Location:206122..218341   Strand:+
Raw sequence 
>bmy_19170
ATGCCACAGGAAGTGGCTCTGCTGCAAATAGCACTGGGCTCTCTTCTCTTCTCAGGGTGCAACATAGAAAATGCCTGCTACCCACTGGGCGTCTGTGCTGAACGAACTGCCATCCAGAAGGCCATCTCAGAAGGGTACAAAGAGTTCAGGGCAATTGCTATCTCCAGTAACTTGCAAGATGATTTTATCTCCCCATGTGGGGCCTGCCGGCAGGTCATGAGAGAGTTCGGCACTGACTGGGCTGTCTACATGACCAAGCCAGATGGCACGTACGTTGTCAGGACAGTCCAGGAGCTGCTGCCTGCCTCCTTTGGGCCSGAGGACCTGCAGAAGATCCAGTGA

Related Sequences

bmy_19170T0 SequenceType object (3)

Length: 114 aa      View alignments
>bmy_19170T0
MPQEVALLQIALGSLLFSGCNIENACYPLGVCAERTAIQKAISEGYKEFRAIAISSNLQDDFISPCGACRQVMREFGTDWAVYMTKPDGTYVVRTVQELLPASFGPEDLQKIQ*