Part of scaffold_1972 (Scaffold)

For more information consult the page for scaffold_1972 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PINK1 ENSTTRG00000011280 (Bottlenosed dolphin)

Gene Details

PTEN induced putative kinase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010694, Bottlenosed dolphin)

Protein Percentage 77.8%
cDNA percentage 78.32%
Ka/Ks Ratio 0.25161 (Ka = 0.0166, Ks = 0.0662)

PINK1 ENSBTAG00000006084 (Cow)

Gene Details

serine/threonine-protein kinase PINK1, mitochondrial

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029455, Cow)

Protein Percentage 90.63%
cDNA percentage 91.09%
Ka/Ks Ratio 0.16307 (Ka = 0.047, Ks = 0.288)

PINK1  (Minke Whale)

Gene Details

PTEN induced putative kinase 1

External Links

Gene match (Identifier: BACU005739, Minke Whale)

Protein Percentage 98.35%
cDNA percentage 98.69%
Ka/Ks Ratio 0.26922 (Ka = 0.0077, Ks = 0.0287)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1731 bp    Location:225517..239720   Strand:+
>bmy_19171
ATGGCGGTGCGACAGGCGCTGGGCCGGGGCCTGCAGCTGGGCCGAGCGCTGCTACTGCGCTTCACGGCCAAGCCTGGCCCGACCTACGGCTGGGGGCGACCGGAGCGGCCGGGCCCCGCGGCGGGCTGGGGTCGCGGGGAGCGCCCGGGCCAGGCCGCGGGACCCGGCGCGGAGCCGCGCAGGCTCGGGCTCGGGCTCCCCGGCCGCTACCGCTTCTTCCGCCAGTCGGTGGCCGGGCTGGCGGCGCGGCTCCAGAGGCAGTTCGTGGGGTGGCCCCGGGGCGGCGCGGGCCCTTGCGGCCGGGCCGTCTTTCTGGCCTTCGGGCTGGGGCTGGGTCTCATCGAGGAGAAGCAAGCGGAGGGCCGGCGGGCGGCCTCGGCCTGTGATGAGATCCAGGCAGTTTTCACCCAGAAAAACAAGCTGCTCCCTGACCCACTGGACGCTAGACGCTGGCAGGGTTTCCGGCTGGAGGAGTATCTGATCGGGAAGTCCATTGGCAAGGGCTGCAGTGCCGCTGTCTATGAGGCCACCATGCCTGTGTTGCCCCAGGACCAGCAGGTGGCAGGGAGCATCGAGCTTCTTCCAGGGAGAGGCCCAGAGATCGTTCCACAAGGAGAAGAGGAGCAAGCCCCACTGGCCCCTGCCTTTCCCTTGGCCATCAAGATGATGTGGAACATCTCGGCGGGCTCATCCAGCGAAGCCATCTTTAGCACAATGAGCCAGGAGCTCGTCCCAGCCAGTCGAGTGGCCTTGGCCGGGGAAAGATCCAAGGGGGGTCCCAAGCAGCTGGCCGCACACCCCAACGTCATCCGCGTCTTCCGCGCCTTCACATCGTCTGTGCCACTGCTGCCAGGGGCCCTGCTCGACTACCCTGACGTGCTGCCCCCGCGCCTTCACCCCGAAGGCCTGGGCCACGGGCGGACACTCTTCCTTGTCATGAAGAACTACTCCTGTACCCTGCGCCAGTACCTTCGTGGGAACAGCCCGAGCCCCCGCCTGGCCACCGTGATGACTCTGCAGCTCCTGGAAGGGGTGGCTCACCTGGTGCAGCAGGGCGTCGCACACAGAGACCTGAAATCCGACAACGTCCTCGTGGAGCTGGACGCAGACGGCTGCCCCTGGTTGGTGATCACAGACTTCGGCTGCTGCCTGGCTGATGAGCGCGTCGGCCTGCGGTTGCCTTTCACCAGTTGGTATGTGGACCGTGGTGGAAACGGCTGCCTGATGGCCCCTGAGGTGTCCACAGCCTGCCCTGGCCCCAGGGCAGTGATCGACTACAGCAAGGCTGATGCCTGGGCAGTGGGAGCGCTCGCCTACGAAATCTTCGGGCTCCCCAATCCCTTTTACGGTCAGGGCAGGGCCCACCTTGAAAGCCGCAGTTACCAAGAAGCTCAGCTGCCAGCGCTGCCCGAGTCGGTGCCTCTGGAGACGAGACAGCTGGTGAGGTCACTGCTCCAGCGAGATGCCAGCAAGAGGCCATCTGCCCGAGTGGCTGCTAACGTGCTTCATTTAAGCCTCTGGGGTGAACGTACTCTAGCCCTGAAGAACCTGAAACCAGACAGGATGATCGGCTGGCTCCTCCAACAATCAGCCGCCACTCTGCTGGCCAGCAGGCTTGCAGAGAAGAACTGTGTGGAAACAAAAATGAAGATGTTATTTCTGGCCAACCTGGAGTATGAAGCGCTGAGTCAGGCAGCCCTCCTCCTCTGCTCGTGGAGGGCGGCCCCGTGA

Related Sequences

bmy_19171T0 Protein

Length: 577 aa      View alignments
>bmy_19171T0
MAVRQALGRGLQLGRALLLRFTAKPGPTYGWGRPERPGPAAGWGRGERPGQAAGPGAEPRRLGLGLPGRYRFFRQSVAGLAARLQRQFVGWPRGGAGPCGRAVFLAFGLGLGLIEEKQAEGRRAASACDEIQAVFTQKNKLLPDPLDARRWQGFRLEEYLIGKSIGKGCSAAVYEATMPVLPQDQQVAGSIELLPGRGPEIVPQGEEEQAPLAPAFPLAIKMMWNISAGSSSEAIFSTMSQELVPASRVALAGERSKGGPKQLAAHPNVIRVFRAFTSSVPLLPGALLDYPDVLPPRLHPEGLGHGRTLFLVMKNYSCTLRQYLRGNSPSPRLATVMTLQLLEGVAHLVQQGVAHRDLKSDNVLVELDADGCPWLVITDFGCCLADERVGLRLPFTSWYVDRGGNGCLMAPEVSTACPGPRAVIDYSKADAWAVGALAYEIFGLPNPFYGQGRAHLESRSYQEAQLPALPESVPLETRQLVRSLLQRDASKRPSARVAANVLHLSLWGERTLALKNLKPDRMIGWLLQQSAATLLASRLAEKNCVETKMKMLFLANLEYEALSQAALLLCSWRAAP*